Staphylococcus aureus subsp. aureus JH1 (MRSA/VSSA): SaurJH1_1780
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Entry
SaurJH1_1780 CDS
T00556
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sah
Staphylococcus aureus subsp. aureus JH1 (MRSA/VSSA)
Pathway
sah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SaurJH1_1780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sah03400
]
SaurJH1_1780
Enzymes [BR:
sah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SaurJH1_1780
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SaurJH1_1780
DNA repair and recombination proteins [BR:
sah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SaurJH1_1780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
HTH_66
DZR_2
Cdh1_DBD_1
Motif
Other DBs
NCBI-ProteinID:
ABR52624
LinkDB
All DBs
Position
complement(1845839..1846711)
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AA seq
290 aa
AA seq
DB search
MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYT
ITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSN
DKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNKPIKQV
ILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSI
SDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattaccagaagtagaacatgtaaaaagaggaattgaaccctacgttataaat
caaaaaattgaacacgttatattttcggataaagtaatcgaaggtaaagctcaaggcaag
gaaacaattataaaaggaattgaattagatacttttaaaactttatcggaaggctatacc
attacaaatgtagaacgaagaagtaaatatatcgtttttcagctagataataaacgagaa
caacgtacattaattagtcatttaggtatggcgggtggttttttcattgtagatgaactt
gaagatattatgatacctaattatcgtaagcattggcatgttatttttgagttgtcaaat
gacaaaaagttaatttattcagatatacgtcgttttggagaaattagaaatgttgcgtct
gtagcatcttatccttcatttttagaaatagcgcctgaaccttttacaaatgaagcattg
acgtattatttaaatcgaattcatcaacagtctaataagaataaaccaatcaaacaagtg
attttggatcataaagtaatcgcaggttgcggaaatatttacgcatgtgaagcgttgttt
cgtgcaggtgttttaccagataaaaaagtaaaagacttaacacaccaacaacaagaaatg
gttttttattatgttagagaagtactagaagaaggtattaagcatggcggtacaagtatt
tcagattatcgtcatgctgatggaaaaactggtgagatgcaattgcatcttaatgtatat
aagcagccggtatgcaaagtgtgtggaagtcaaattgaaacaaaaatcatcgcgacaaga
aatagtcattattgtccagtatgtcaaaaataa
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