Sphingopyxis alaskensis: Sala_1651
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Entry
Sala_1651 CDS
T00361
Name
(GenBank) DEAD/DEAH box helicase-like protein
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
sal
Sphingopyxis alaskensis
Pathway
sal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sala_1651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sal03400
]
Sala_1651
Enzymes [BR:
sal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sala_1651
DNA repair and recombination proteins [BR:
sal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sala_1651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecG_dom3_C
RecG_wedge
AAA_30
Cdd1
Zeta_toxin
Flavi_DEAD
TsaE
DUF3638
Motif
Other DBs
NCBI-ProteinID:
ABF53364
UniProt:
Q1GSK8
LinkDB
All DBs
Position
complement(1732973..1735078)
Genome browser
AA seq
701 aa
AA seq
DB search
MQVGKARAKHRSPMRPEILNPLFAALTDLKGVGPQLAKPLTRLGLERLVDVLFHLPTGLI
SRIAVERLDQAQPGQTIIVDLTVQDYRPGRSPRAPFGVEAFDRAGDHVRLVYFGRTSGLA
RKLFPLGETRRVSGRLDLYGDMRQIVHPDHVAEPGDEGAIAEHEPVYPLTEGLTNARLSQ
LAAIALDRRPDLAEWIDAPLLASRNWPDWREAVARAHANPRDEAARDRLAYDEIFANQVA
LMLIRQGLRNRRGRAIVGDGRLTGALRLPFGLTGAQERVGREIAGDMAQDTPMLRMLQGD
VGSGKTLVALRAMLTAVEAGTQAALLAPTEILARQHHATLRAMLAGLPVNLAILTGRDKG
RVRESTLMGLADGSIDILIGTHAIFQQAVTYRDLALVVVDEQHRFGVAQRLMLTQKAARP
PHLLVMTATPIPRTLLLANHGEMDVSRIDEMPPGRTPVDTRVVSVERLDEVIASLERHLA
TGAQAYWVCPLVAESEASELAAAEARAALLAERLGAARVGLVHGRMKGPEKDDVMARFQS
GAIGVLVATTVIEVGVDVPAASLMVVEHAEHFGLAQLHQLRGRVGRGAAKSVCLLLRSPT
LSETARERLALMRETNDGFVIAERDLELRGGGELLGLKQSGEADYRLASPEQLVRLLPVA
HDDARLFVERDGGMEGARGEAVRLCLYLFERDAAVPLLRSG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagttggcaaagctcgcgctaaacaccgatcaccgatgcgacccgaaatcctcaat
ccactctttgccgcgctcactgacctgaaaggtgtcgggccgcaactcgccaagccactg
acgcggcttgggctggagcgcctcgtcgatgtgctgttccatctgccgacgggactcatc
tcgcgcatcgccgtcgagcggctcgatcaggcgcagcccggacagacgatcatcgtcgat
ctgaccgtgcaggattatcgtcccggccgcagcccgcgtgccccgttcggcgtcgaggcg
ttcgatcgcgcgggcgatcatgtgcggctcgtctatttcgggcggacatcggggctggcg
cgcaagctgttcccgctgggcgagacgcgccgcgtgtcggggcggctcgacctgtacggc
gacatgcgccagatcgtccatcccgaccatgtcgccgaacccggcgacgaaggcgcgata
gctgagcatgagcccgtctatccgctgaccgaaggcctcaccaacgcgcggctgtcgcag
cttgccgcgatcgcgctcgaccggcgccccgacctcgccgaatggatcgacgcgcccctg
ctcgcgagccgcaactggcccgactggcgcgaggcggtggcgcgcgcgcacgccaacccg
cgcgacgaggccgcgcgcgaccggctcgcctatgacgagattttcgccaatcaggtcgcg
ctgatgctgatccggcaggggctgcgcaaccgcagggggcgcgcgatcgtcggtgacggc
cgcctgaccggcgcgctacgcctgccgttcgggctcacgggggcgcaggagcgcgtcggg
cgcgagattgcgggcgacatggcgcaggacacgccgatgctgcggatgctgcagggcgat
gtcgggtcgggcaagacgctggtggcgctgcgtgcgatgctgaccgcggtcgaagcgggg
acgcaggcggcgctgctcgcgccgaccgaaatcctggcgcgccagcatcatgcgaccttg
cgggcgatgctcgcgggcctgccggtgaacctcgccatcctgaccgggcgcgacaagggg
cgggtgcgcgaatcgacgctgatgggcctcgccgacggcagcatcgacatattgatcggc
acccatgcgatttttcagcaggcggtgacatacagggatctcgcgctcgtcgtcgtcgac
gaacagcatcgcttcggcgtcgcgcagcggttgatgctgacgcaaaaggcggcgcggccg
ccgcacctgctggtgatgaccgcgacgccgatcccgcgcaccctgctgctcgccaatcat
ggcgaaatggacgtgtcgcggatcgacgagatgccgccggggcgcacccccgtcgacacg
cgcgtcgtgtcggtcgagcggctcgacgaggtgatcgcctcgctcgaacgccatctcgcg
acgggcgcgcaggcctattgggtgtgcccgctcgtcgccgaaagcgaggcaagcgagctg
gcggcggccgaggcccgcgccgcgctgctcgccgagcggctgggcgcggcgcgcgtcggg
ctggtccacgggcggatgaaagggcccgaaaaggatgacgtcatggcgcgcttccagtcc
ggcgcgatcggcgtgctcgtcgccacgaccgtgatcgaggtgggcgtcgatgtccctgcc
gccagcctgatggtcgtcgaacatgccgagcatttcggcctcgcccagctgcaccagctg
cgcggtcgcgtcgggcgcggcgcagcgaaatcggtgtgcctgctgctgcggtcgccgact
ctgtcggagacggcgcgcgagcggctggcgctgatgcgcgagaccaacgacggcttcgtg
attgccgaaagggatctcgaactgcgcggcggcggtgaactgctgggcctcaaacagtcg
ggggaggccgattatcggctggcgagccccgaacagctggtgcgcctgctccccgtcgcg
cacgacgatgcgcggctgttcgtcgaacgcgacggcgggatggagggcgcgcgcggcgag
gcggtgcggctttgtctctatctcttcgaacgcgatgcggcggtgccgctgctacggagc
gggtag
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