KEGG   Sphingopyxis alaskensis: Sala_2728
Entry
Sala_2728         CDS       T00361                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
sal  Sphingopyxis alaskensis
Pathway
sal02024  Quorum sensing
sal03060  Protein export
sal03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Sala_2728
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Sala_2728
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Sala_2728
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sal02044]
    Sala_2728
Enzymes [BR:sal01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Sala_2728
Secretion system [BR:sal02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Sala_2728
  Eukaryotic Sec-SRP protein
   Sala_2728
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 AAA_16 AAA_19 AAA_31 AAA_33 ABC_tran ResIII TctA AAA_24 AAA AAA_17 Thymidylate_kin YqeC AAA_14 DnaB_C APS_kinase ArsA_ATPase cobW NACHT GTP_EFTU MMR_HSR1 AAA_28 NB-ARC 6PF2K nSTAND3 AAA_7 AAA_5 KTI12 TsaE
Other DBs
NCBI-ProteinID: ABF54433
UniProt: Q1GPI9
LinkDB
Position
complement(2873285..2874739)
AA seq 484 aa
MFDSLSNRLGDVFGKLRGRGALTEADVRAAMREVRIALLEADVALPVVRSFVDQVTELAI
GQNVLRSVTPGQQVVKIVNDALTEMLGSETAELDLAVAPPAVIMMVGLQGSGKTTTTAKI
AKRLREKERKKVLMASLDVNRPAAQEQLAVLGQQIDVATLPIIVGQQPVEIAQRALQAAK
LQGYDVLMLDTAGRLHVDQQLMDEMQAVSRTANPAETLLVVDSLTGQDAVQVAQRFTDQV
PLTGVVLTRMDGDARGGAALSMRAVTGKPIKFAGTGEKLDGLELFQPSRIAGRILGMGDV
VSLVERAAETIQADEAEAMAAKMAKGQFDLNDLRTQLNQMRRMGGLGALAGMIPGIKKAQ
AAMAAGGADDKMLVHFDAIMGSMTPKERAKPEIINAKRKIRIANGSGTTVQQVNKVLKMH
QEMSTAMKKIRKMGGLKGLGALFGRGGGIPGMPGLGGGGMGGGLPGLGGGGMPPDLANLL
NKKK
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgttcgacagtctgagcaatcggcttggcgatgttttcgggaagctccgcggtcgcggc
gcgctgaccgaggccgacgtgcgcgccgcgatgcgcgaggtacgaatcgcgttgctcgag
gccgatgtcgcgctgcccgtcgtgcgcagcttcgtcgatcaggtcaccgaactcgcgatc
ggccagaatgtcctgcgctcggtcacgccggggcagcaggtggtcaagatcgtcaatgac
gcgctgaccgaaatgctcggctccgaaaccgccgaactcgatctggcggtcgccccgccc
gcggtgatcatgatggtcggccttcagggatcgggtaagaccaccacgacggcaaagatc
gccaagcgtctcagggaaaaggagcgcaagaaggtgctgatggcgtcgctcgacgtcaat
cgccccgccgcgcaggaacagcttgccgtgcttggtcagcagatcgatgtcgcgaccttg
ccgatcattgtcggccagcagccggtcgaaatcgcgcagcgcgcgttgcaggccgcgaag
cttcagggctatgacgtgctgatgctcgacactgcgggccggctccacgtcgaccagcaa
ctgatggacgagatgcaggcggtgtcgcgcacggcgaacccggccgaaacattgctcgtc
gtcgacagcctgaccggtcaggacgcggtccaggtcgcgcagcgcttcacggatcaggtg
ccgctcaccggggtcgtcctgacgcgcatggacggcgatgcgcgcggcggcgccgcgctg
tcgatgcgcgcggtcaccggcaaaccgatcaagttcgcgggcacgggcgagaaactcgac
gggctcgagttgttccagccgtcgcgtatcgcgggccgcatccttggcatgggcgacgtg
gtcagcctggtcgagcgcgccgccgaaacgatccaggcggacgaagccgaagcgatggcg
gccaagatggccaagggtcagttcgacctcaacgaccttcgcacgcagctgaatcagatg
cgccgcatgggaggcctcggcgcgctcgcggggatgatcccggggatcaagaaggcgcag
gcggcgatggccgcgggcggcgccgacgacaagatgctcgttcacttcgatgcgatcatg
gggtcgatgacgccgaaggagcgcgcgaagcccgaaatcatcaacgccaagcgcaagatc
cgcatcgccaacgggtcgggcacgacggtgcaacaggtgaacaaggtgctgaagatgcac
caggaaatgtccaccgcgatgaagaagatccgcaagatgggcggcctcaagggcctcggc
gcgctgttcgggcgcggcggcggcattcccggaatgccggggcttggcggcggcggaatg
ggaggcggtctgcccggcctcggtggcggcggcatgccccccgatctcgccaacctgctc
aacaagaagaaatga

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