Streptomyces albidoflavus: XNR_4143
Help
Entry
XNR_4143 CDS
T02545
Name
(GenBank) Exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
salb
Streptomyces albidoflavus
Pathway
salb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
salb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
XNR_4143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salb03400
]
XNR_4143
Enzymes [BR:
salb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
XNR_4143
DNA repair and recombination proteins [BR:
salb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
XNR_4143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
SnoaL_2
Motif
Other DBs
NCBI-ProteinID:
AGI90477
LinkDB
All DBs
Position
complement(4699840..4701084)
Genome browser
AA seq
414 aa
AA seq
DB search
MGVDTSADAPLPVGAVSRLIGGWIDRLGAVWVEGQITQLSRRPGAGVVFLTLRDPAHDIS
VGVTCYRKVFDAVADVVTEGARVVVHAKPEWYAPRGQLSLRAAEIRPVGVGELLVRLEQR
RKALAAEGLFALERKRPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVAVQ
GVHAVAQVTEAVRELDAHPEVDVIVVARGGGSVEDLLPFSDEELIRTVSAARTPVVSAIG
HEPDTPLLDLVADLRASTPTDAAKKVVPDVGEEHERVRQLRDRARRAAHGLVDREERGLA
HALARPSIQHPHRMVEEREERVSALLDRSRRTLGHLLDRADSELSHTRARVVALSPAATL
QRGYAVLQTAEGAVVRAPEDVAYGAELRARVAEGELVVRRVDEDGADGAEAAGG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtagatacgtctgcggacgcgccgctgcccgtcggagccgtctcccggctgatc
ggggggtggatcgaccggctgggcgcggtctgggtcgagggacagatcacgcagctctcg
cggcggccgggggcgggcgtggtcttcctgacgctccgcgacccggcgcacgacatctcg
gtgggcgtgacctgctaccgcaaggtcttcgacgccgtggcggacgtcgtcaccgagggt
gcccgcgtcgtcgtccacgccaagccggagtggtacgcgccccgggggcagctgtcgctg
cgggccgccgagatccgcccggtcggcgtgggcgagctgctggtccggctggagcagcgg
cgcaaggcgctggcggcggaggggctgttcgcgctggagcgcaagcgtccgctgccgttc
ctgccgcagctgatcggcctggtctgcggccgcgcctcggccgccgagcgggatgtcctg
gagaacgcccggcaccgctggccggccgtccgtttcgaggtgcgcaacgtcgcggtgcag
ggcgtgcacgcggtcgcccaggtgaccgaggcggtccgcgagctggacgcgcacccggag
gtcgacgtcatcgtggtggcgcgcggcggcggcagcgtggaggacctgctgcccttctcc
gacgaggagctgatccgcaccgtctcggccgcccgcaccccggtggtctccgcgatcggc
cacgagccggacaccccgctgctggacctggtggcagacctgcgcgcctccacgcccacg
gacgccgccaagaaggtcgtcccggacgtcggcgaggagcacgagcgggtccgccagctc
cgcgaccgggcccgccgcgccgcgcacggcctggtcgaccgcgaggagcggggcctcgcc
cacgccctggcccgcccctcgatacagcacccgcaccgcatggtcgaggagcgcgaggag
cgggtctcggccctgctggaccgctcccggcggaccctgggccacctcctggaccgcgcc
gactccgagctgtcccacacccgcgcccgggtggtggcgctctccccggcggcgacgctc
cagcgggggtacgcggtcctgcagacggccgagggtgccgtggtgcgagcgccggaggac
gtggcgtacggggcggagctgcgggcccgggtcgccgagggcgagctggtggtgcgccgg
gtcgatgaagacggggcggacggggcggaggccgccggaggctga
DBGET
integrated database retrieval system