Streptomyces albidoflavus: XNR_4180
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Entry
XNR_4180 CDS
T02545
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
salb
Streptomyces albidoflavus
Brite
KEGG Orthology (KO) [BR:
salb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salb03019
]
XNR_4180
03009 Ribosome biogenesis [BR:
salb03009
]
XNR_4180
Messenger RNA biogenesis [BR:
salb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XNR_4180
Ribosome biogenesis [BR:
salb03009
]
Eukaryotic type
Pre-60S particles
RNases
XNR_4180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AGI90513
UniProt:
D6B299
LinkDB
All DBs
Position
complement(4738269..4738871)
Genome browser
AA seq
200 aa
AA seq
DB search
MNDRMVWIDCEMTGLSLADDALIEVAALVTDSELNVLGDGVDIVIRPPDEALETMPEVVR
KMHTSSGLLAELAEGTTLADAEAQVLAYVREHVKEPGKAPLCGNSVGTDRNFLARDMAAL
EGYLHYRIVDVSSVKELARRWYPRAYFNSPDKNGNHRALADIRESIAELRYYREAIFVPQ
PGPDSDTAKAIAAQHVLTSE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccgcatggtgtggatcgactgcgagatgaccgggctctcgctggcggacgac
gcactcatcgaggtggccgcgctggtcaccgactcggaactgaacgtgctcggcgacggc
gtggacatcgtgatccgtccgccggacgaggcgctggagaccatgcccgaggtggtgcgc
aagatgcacacctcctccggactcctcgccgagctggcggagggcaccacgctggccgac
gcggaggcgcaggtcctcgcgtacgtccgtgagcacgtcaaggagcccggcaaggctccg
ctgtgcgggaactcggtcggcaccgaccggaacttcctcgcgcgggacatggcggcgctg
gaggggtacctccactaccgcatcgtggacgtctcctcggtgaaggagctggcgcgccgg
tggtacccgcgggcctacttcaacagccccgacaagaacggcaaccaccgcgccctcgcc
gacatccgcgagtccatcgccgagctgcgctactaccgcgaggcgatcttcgtgccgcag
cccgggcccgactccgacaccgcgaaggcgatcgccgcccagcacgtgctgacctcggaa
taa
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