Salinimonas iocasae: FBQ74_12525
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Entry
FBQ74_12525 CDS
T06006
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
salk
Salinimonas iocasae
Pathway
salk02020
Two-component system
salk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
salk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FBQ74_12525
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FBQ74_12525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salk03021
]
FBQ74_12525
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
salk02035
]
FBQ74_12525
Transcription machinery [BR:
salk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FBQ74_12525
Bacterial motility proteins [BR:
salk02035
]
Flagellar system
Flagellar assembly proteins
Stator
FBQ74_12525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
GerE
CT_C_D
HTH_38
Motif
Other DBs
NCBI-ProteinID:
QCZ94243
UniProt:
A0A5B7YG21
LinkDB
All DBs
Position
complement(2824473..2825201)
Genome browser
AA seq
242 aa
AA seq
DB search
MNSKAAAYSQQIDKSQLVERHASLVKRIAHHLMARLPASVLVDDLIQAGMIGLLEAARNF
DGSKGASFETFAGIRIRGAMLDEIRKGDWTPRSVHKNGRAITDAIKEVERETGRDARDTE
IAEKLNVDIDTYHQMLNEVNAGKLVGIEDLGVSEDVITAPTNQGNDLPLEDLMQGAFQKA
LAQAITTLPEREAIVLSLYYDEELNLREIGEVLDVSESRVSQIHSQAMLKLKAKMQSWRA
DN
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
ttgaatagcaaagcggctgcttactcacagcaaatcgataaatctcagcttgtcgaaaga
cacgcttctctggtcaaacgtatcgcccatcatttgatggcgcgactacctgcaagtgtg
ctggtagatgatttgattcaagccgggatgataggtttgctggaagctgcacgaaatttt
gacggttcaaaaggtgccagtttcgaaaccttcgccggtatccgtattcgtggggcgatg
cttgatgaaatacgtaaaggcgactggacaccgcgctctgtacataaaaatggcagagcg
ataaccgatgcaattaaggaggttgaacgggaaaccggtcgcgatgcccgggataccgaa
attgcagaaaaactgaatgtcgatattgatacctaccatcagatgcttaatgaagtaaat
gcgggcaagctggtggggatcgaagatttaggggtgtcggaagatgttatcaccgcaccg
actaaccagggcaacgatttgcctttagaagatttaatgcagggggcgtttcaaaaggcc
cttgcacaggcaatcactacattgcctgagcgtgaagcaattgtgttgtcgttatactat
gatgaagagttgaatttacgcgaaattggtgaagtgctcgatgtcagtgaatcacgggtc
agccagattcacagtcaggccatgttaaaattaaaagctaaaatgcaatcgtggcgtgcc
gataactaa
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integrated database retrieval system