KEGG   Salinimonas iocasae: FBQ74_12525
Entry
FBQ74_12525       CDS       T06006                                 
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
salk  Salinimonas iocasae
Pathway
salk02020  Two-component system
salk02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:salk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FBQ74_12525
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    FBQ74_12525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:salk03021]
    FBQ74_12525
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:salk02035]
    FBQ74_12525
Transcription machinery [BR:salk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     FBQ74_12525
Bacterial motility proteins [BR:salk02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    FBQ74_12525
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_r3 HTH_23 UPF0122 GerE CT_C_D HTH_38
Other DBs
NCBI-ProteinID: QCZ94243
UniProt: A0A5B7YG21
LinkDB
Position
complement(2824473..2825201)
AA seq 242 aa
MNSKAAAYSQQIDKSQLVERHASLVKRIAHHLMARLPASVLVDDLIQAGMIGLLEAARNF
DGSKGASFETFAGIRIRGAMLDEIRKGDWTPRSVHKNGRAITDAIKEVERETGRDARDTE
IAEKLNVDIDTYHQMLNEVNAGKLVGIEDLGVSEDVITAPTNQGNDLPLEDLMQGAFQKA
LAQAITTLPEREAIVLSLYYDEELNLREIGEVLDVSESRVSQIHSQAMLKLKAKMQSWRA
DN
NT seq 729 nt   +upstreamnt  +downstreamnt
ttgaatagcaaagcggctgcttactcacagcaaatcgataaatctcagcttgtcgaaaga
cacgcttctctggtcaaacgtatcgcccatcatttgatggcgcgactacctgcaagtgtg
ctggtagatgatttgattcaagccgggatgataggtttgctggaagctgcacgaaatttt
gacggttcaaaaggtgccagtttcgaaaccttcgccggtatccgtattcgtggggcgatg
cttgatgaaatacgtaaaggcgactggacaccgcgctctgtacataaaaatggcagagcg
ataaccgatgcaattaaggaggttgaacgggaaaccggtcgcgatgcccgggataccgaa
attgcagaaaaactgaatgtcgatattgatacctaccatcagatgcttaatgaagtaaat
gcgggcaagctggtggggatcgaagatttaggggtgtcggaagatgttatcaccgcaccg
actaaccagggcaacgatttgcctttagaagatttaatgcagggggcgtttcaaaaggcc
cttgcacaggcaatcactacattgcctgagcgtgaagcaattgtgttgtcgttatactat
gatgaagagttgaatttacgcgaaattggtgaagtgctcgatgtcagtgaatcacgggtc
agccagattcacagtcaggccatgttaaaattaaaagctaaaatgcaatcgtggcgtgcc
gataactaa

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