KEGG   Streptomyces albulus ZPM: SAZ_09465Help
Entry
SAZ_09465         CDS       T03896                                 

Definition
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sall  Streptomyces albulus ZPM
Pathway
sall03030  DNA replication
sall03410  Base excision repair
sall03420  Nucleotide excision repair
sall03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sall00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SAZ_09465
   03410 Base excision repair
    SAZ_09465
   03420 Nucleotide excision repair
    SAZ_09465
   03430 Mismatch repair
    SAZ_09465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sall03032]
    SAZ_09465
   03400 DNA repair and recombination proteins [BR:sall03400]
    SAZ_09465
Enzymes [BR:sall01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SAZ_09465
    6.5.1.6  DNA ligase (ATP or NAD+)
     SAZ_09465
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SAZ_09465
DNA replication proteins [BR:sall03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    SAZ_09465
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     SAZ_09465
DNA repair and recombination proteins [BR:sall03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SAZ_09465
   NER (nucleotide excision repair)
    Other NER factors
     SAZ_09465
   MMR (mismatch exicision repair)
    Other MMR factors
     SAZ_09465
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N RNA_ligase PNKP_ligase
Motif
Other DBs
NCBI-ProteinID: AKA02622
LinkDB All DBs
Position
complement(2195631..2197166)
Genome map
AA seq 511 aa AA seqDB search
MLLAAVARVSAEVAATTARSRKTALLAELFRAAAPEDAPVVIPYLAGRLPQGRIGIGWSA
LRDPPPPADRATLTVRDADRALTTLARVAGPGAQAERRRLVRDLLAAATAEEQRFLHGLL
TGEVRQGALDALAVEGLAAATGAAPDAVRRAVMLAGSLPDVARALLSEGPPALADFRLTV
GRPVGPMLAQTAASVAEAIDRLGRCAVEEKLDGIRVQVHRDGPDVRIHTRTLDEVTDRLP
EVVALVRALPAARLILDGEVIALGPDGRPVPFQRVAGRFGSRTDVAAALAALPLTPVFFD
LLALDDRALLDLPGEQRHAELAVCVPESARVRRCVVADPDDPGARAAAAEFFDRTLARGH
EGVVVKALDAPYGAGRRGAAWLKVKPVHTLDLVVLAAEWGHGRRTGKLSNLHLGARAADG
GFVMLGKTFKGLTDATLTWQTARLQELAVADDGHVVTVRPELVVEIAYDGLQTSSRYPAG
VTLRFARVVRYREDKPAAEADTLDTVRAAHG
NT seq 1536 nt NT seq  +upstreamnt  +downstreamnt
atgctgctcgccgccgtcgcccgcgtgtccgcggaggtcgccgccaccacggcccgctcg
cggaagacggcgctgctggccgagctgttccgcgccgccgcccccgaggacgccccggtg
gtcatcccctacctggccgggcggctgccccagggcaggatcggcatcggctggagcgcc
ctgcgcgacccgccgccacccgccgaccgggccaccctcaccgtccgcgacgcggaccgg
gcactgaccacgctggcccgggtggccggccccggtgcccaggccgagcggcggcgcctg
gtccgcgacctcctcgccgccgccaccgccgaggagcagcgcttcctgcacgggctgctg
accggcgaggtccgccagggcgctctggacgcgctcgccgtcgaggggctcgccgccgcc
accggcgcggccccggacgcggtccggcgcgccgtgatgctcgccggctcgctcccggac
gtcgcccgcgcgctgctctcggaggggccgccggccctggccgacttccggctcaccgtc
ggccggccggtcggaccgatgctcgcgcagaccgccgcctcggtggccgaggcgatcgac
cggctcggccgctgcgccgtggaggagaagctcgacggcatccgggtgcaggtgcaccgg
gacggccccgacgtgcggatccacacccgcaccctggacgaggtcaccgaccggctgccc
gaggtcgtggccctcgtccgggcgctgcccgccgcgcgcctgatcctcgacggcgaggtg
atcgccctggggccggacggccgcccggtcccgttccagcgggtcgccggccgcttcggc
tcccgcacggacgtcgccgcggccctggccgccctcccgctgaccccggtcttcttcgac
ctgctcgcgctcgacgaccgggcgctgctggacctccccggcgagcagcggcacgccgaa
ctcgccgtatgcgtaccggagtcggcccgggtgcggcgctgcgtggtggcggacccggac
gaccccggggcgcgcgccgccgccgcggagttcttcgaccgcaccctggcgcgcggccac
gagggcgtcgtggtcaaggccctcgacgcgccctacggcgccggccgccgcggcgcggcc
tggctgaaggtcaagcccgtgcacaccctggacctggtggtgctggcggcggagtggggc
cacggccgccgcaccggcaagctctccaacctgcacctgggggcgcgggccgcggacggc
gggttcgtcatgctgggcaagaccttcaaggggctcaccgacgccaccctcacctggcag
accgcgcggctgcaggagctggccgtcgcggacgacgggcacgtggtgacggtccgcccg
gaactcgtcgtggagatcgcctacgacgggttgcagacctcgtcccgctacccggccggg
gtcaccctgcggttcgcccgcgtggtgcgctaccgggaggacaagccggccgcggaggcc
gacaccctcgacaccgtgcgcgccgcccacggctga

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