KEGG   Salinimonas sediminis: D0Y50_08600Help
Entry
D0Y50_08600       CDS       T05624                                 

Gene name
mrdA
Definition
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
salm  Salinimonas sediminis
Pathway
salm00550  Peptidoglycan biosynthesis
salm01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:salm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    D0Y50_08600 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    D0Y50_08600 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:salm01011]
    D0Y50_08600 (mrdA)
Enzymes [BR:salm01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     D0Y50_08600 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:salm01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   D0Y50_08600 (mrdA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Transpeptidase PBP_dimer Phosphoesterase MtrB
Motif
Other DBs
NCBI-ProteinID: AXR06419
UniProt: A0A346NLL2
LinkDB All DBs
Position
complement(1911879..1913774)
Genome map
AA seq 631 aa AA seqDB search
MVRKRQQIRDHSAEANLFARRTAIALLIVIGMLAVVISNLYVLQVKQFEDYQTRSNGNRI
KVVPIAPNRGLIYDRNGILLAENRPVFSLEVVPEQIEDLDATLAELTDLMSLTQEELDDF
AQHLKGQRRFKPVALRTQLNEEDVARFSAHQHRFPGVSIEARLSRYYPYGDTLTHILGYV
AKINKNDLQKIVEAGQEANYAATHDIGKLGIEKFHEDVLHGEVGYQQVEVNSQGRIIRTL
NIDPPTPGRDIVLNVDLQLQMAVQKTLAGQRGTIVVSDPRTGGMLAMYSSPSYDPNLFVH
GISRANYNELLNSPDRPLINRATQGQYPPASTIKPHLALVGLDTNTITTRHTINDTGRFR
LPNVSHVWRDWRKWGHGKVDVSKAIEVSCDTYYYDLAYKLGIDKISEAMTEFGFGDYTGI
DLYEESDGNMPSRGWKRARFNQPWYIGDTIPVGIGQSFWTATPVQLNQSVNTLINRGERY
VPQIMRGYMHDNGQVQLEPLKTLRPYQVKETKNWDVVLNAMWKVVNGEEGTARHAFKDVG
YVSAGKTGTAQLFAIGQNESYKADEVAEHLRDNAMYVGFAPFDEPQISVTVVIENAGGGS
SNAAPVAREVMDFYFDNIASDFLPGMTGAVQ
NT seq 1896 nt NT seq  +upstreamnt  +downstreamnt
atggtaagaaaacgccaacaaattcgcgaccacagcgctgaagcgaatcttttcgctcgc
cgcacggctattgcattacttatcgttattggcatgctggcagtggtgatcagtaacctg
tatgtgttgcaggtgaagcagtttgaagactatcaaacccgctccaatggtaaccgcatt
aaagttgtacctattgcccctaaccgcggattaatttacgacagaaacggtattttactg
gcagaaaaccggccagtgttcagcttagaagtggtgcctgagcaaattgaagatctggat
gccaccctggctgagcttactgacctgatgagcctgacccaagaagaactggatgatttt
gctcagcatcttaaaggtcagcggcgttttaaaccggtggccctgcgcacccagctcaat
gaagaagatgtagcgcggttttcagcccatcagcatcgctttccaggggtatcaatcgaa
gcccgcctttcgcgctactacccttatggggatacccttacccatattcttggctacgta
gccaaaatcaataaaaacgatttacaaaaaattgttgaagctggtcaggaagccaactac
gcggccacccacgacattggtaaattgggtattgaaaagtttcacgaagatgtcctgcat
ggcgaggtaggctatcagcaggttgaggtgaacagccagggccggattatccgcacgtta
aatattgatccccccacgccggggcgggacattgttctgaatgttgatttgcagctgcag
atggcagtacaaaaaacccttgcaggtcaacgcggcactattgtggtgtcagatcctcgg
actggcgggatgctggcgatgtattccagccccagttacgaccccaatttatttgtacat
ggtatcagccgggcaaactataacgagttactcaactcaccagaccggccactgataaac
cgcgcaacacaagggcaatatccccccgcctccactattaaaccgcacctggcgttggta
ggattagataccaacacaattactacccgccataccatcaacgataccggccgttttcgg
ctacccaatgtttcgcatgtctggcgcgactggcgaaaatgggggcatggaaaagtggat
gtcagcaaagcgatagaagtgtcttgtgatacctattactacgatcttgcctataaactg
ggtatcgacaaaataagtgaagccatgactgaattcggctttggtgactataccggaatc
gatttgtatgaagagtcagatggcaatatgcccagccgcggctggaaacgtgcccggttt
aatcaaccctggtatataggcgacaccattccggtagggataggccaaagtttctggacc
gccacgcccgtgcagttaaatcagtcggtaaatacccttattaatcgcggagagcgctac
gttccgcagattatgcgcggttatatgcacgacaacgggcaggtgcagcttgaaccgctt
aaaactctgcgtccttaccaggtgaaagaaaccaaaaactgggacgttgtgctaaatgca
atgtggaaggtggtgaatggtgaagaagggacagcccgccatgcttttaaagacgtaggc
tatgtgtcggctggtaaaaccggtactgcgcagctattcgccattggccagaacgagtct
tataaagccgacgaagtcgcagagcacttacgagataatgcgatgtacgtgggctttgcg
ccgttcgacgagccacagatatcggttaccgtagtaatcgaaaatgcggggggcggtagc
tctaacgcagcgccagtggcccgtgaggtaatggatttttattttgataatattgcctcc
gacttcttgccaggtatgaccggagcagtgcaatga

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