Salinisphaera sp. LB1: SALB1_2855
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Entry
SALB1_2855 CDS
T05476
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
saln
Salinisphaera sp. LB1
Pathway
saln03030
DNA replication
saln03430
Mismatch repair
saln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SALB1_2855
03430 Mismatch repair
SALB1_2855
03440 Homologous recombination
SALB1_2855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saln03032
]
SALB1_2855
03400 DNA repair and recombination proteins [BR:
saln03400
]
SALB1_2855
Enzymes [BR:
saln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SALB1_2855
DNA replication proteins [BR:
saln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SALB1_2855
DNA repair and recombination proteins [BR:
saln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SALB1_2855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
ISP3_C
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AWN17051
UniProt:
A0A2Z3J714
LinkDB
All DBs
Position
3117352..3120846
Genome browser
AA seq
1164 aa
AA seq
DB search
MTTPFVHLRVHTEYSLSDGIVRIKPLMKQVAEAGMPAVGVTDNVNLFGMVKFYKAALGAG
IKPIVGVDLLVDEGAAPASRLTLIAQHREGYRNLCEILTRSYLHGQTGGQVLTRREWIVE
KSDGLIAVSGGMSGDTGQALLAGKTELAEQHARHWQSIFGDRYYLEVTRCQRSGEAAWLA
ETVGLALATDIPIVATNDVRFPGADDFDAHEARVAIHGGYTLADPRRPRHYTAEQYLKTP
EQMVELFADLPEAIENSVEIARRCNLQLTLGENVLPDFPVPEGHDTDSFLKAESEAGLNE
RLADLYPDADVRETRREEYESRLTHELDVIKTMGFPGYFLIVADFIRWARENGVPVGPGR
GSGAGSLVAYALGITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYVADAY
GHEKVSQIITYGTMAAKAVVRDVGRVLNHPYGFVDRIAKQIPFAPDMTLTRALEESEELR
TSREDEEVGYLLDLALSLEGLSRNAGKHAGGVVIAPSNLIDFTPLYCEPGGTNRVTQFDK
DDVEAVGLVKFDFLGLRTLTIIDNAVQVANARLKKAGKGPIDVRQIPLDDKASFDLLQKG
DTTAVFQLESSGMRRLIKRLQPAEFEDIIALVALYRPGPLESGMVEDFIDRKHGRAKVVY
PHNSLAEVLEPTYGVILYQEQVMQIAQVLAGYSLGNADLLRRAMGKKKPEEMAKQRDGFV
KGAVANNIDEDTAAYIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYPADFMSAVLS
ADMDHTDKVVIMIDECHRLAIEVAPPNVNASEYNFSVVDDTTIRYGLGAIKGLGKGAIEA
VIAERRKGGAFVNLYDFCRRVDTSKINRRAIEALINAGALDDLGPNRASLMHGVTRALAA
AEQDRAASRVGQNDMFGLAETPDTAGPPLDHLDEWPEDERLKAERDTLGLYLTGHPIKAW
EAELERMTDGKIADQVAAMPRPEEGGEGRRSPRKAAVVAGLVVEVRRMKKGKRIIVVLDD
GSGRIECPLFEDKAAEFGHLLVSDKLVIVDGSLQYDDFSDGFRLNANTVMDMETARAAYA
SRILLQLQSEAALDVGALAGCVDRYKADAGCDVVLRYANAQARAVLTLGDTRLRLCEALL
TDLKSLVGADKVQVRYRRAQTSVS
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcccttcgtccatctgcgcgttcataccgagtattcgctgtccgacggcatt
gtgcgcatcaagcctttgatgaagcaggtggccgaggccggcatgccggcggtcggcgtg
accgacaacgtcaacctgttcggcatggtgaagttctacaaggccgcgctcggggccggt
atcaagccgatcgtgggcgtggatctgctggtggacgaaggtgcggcgccggcctcccgg
ctgaccctgatcgcccagcaccgcgagggctatcgcaacctctgcgaaatcctcacgcgg
tcgtacctgcatggccagaccggcggccaggtgctcacccggcgcgaatggatcgtggag
aagtcggacgggctgatcgcggtgtccggcggcatgagcggcgataccggccaggcgctg
ctggccggcaagaccgaactggccgagcagcacgcgcgccactggcaatcgattttcggc
gatcgctactatctggaggtcacgcgttgccagcgcagcggcgaggccgcctggctggcg
gagacggtcggcctggccctggccaccgatattccgatcgtggccaccaacgacgtgcgc
tttcccggcgccgacgatttcgatgcccatgaagcgcgcgtggccatccacggcggctat
acgttggccgatccgcgccggccacgccactacaccgccgaacagtatctcaagacgccc
gagcagatggtcgagctgttcgccgacctgcccgaggcgatcgagaactcggtggagatc
gcgcgtcgctgcaatctccagctcacgctcggcgagaacgtgctgccggactttccggtg
cccgaaggccacgataccgattcgtttctcaaggctgagtccgaggccgggctcaatgaa
cgcctcgcagacctgtatccggacgcggacgtgcgcgagaccaggcgcgaggaatacgag
agccggctgactcacgaactcgacgtcatcaagaccatgggttttccgggctacttcctg
atcgtggccgacttcatccgttgggcgcgtgagaacggcgtgccggtgggtccgggccgc
ggttcaggtgccggctcgctggtggcctacgcactcggcatcaccgatctggacccactc
gcctacgatctgctgttcgagcgcttcctcaatcccgaacgcgtgtccatgcccgacttc
gacgtcgacttctgcatggacggccgcgatcgggtgatcgagtacgtggccgatgcctac
ggccacgagaaggtcagccagatcatcacctacggcacgatggcggccaaggcggtggtg
cgcgacgtcgggcgcgtgctcaatcacccctacggcttcgtcgaccgcatcgccaagcag
atcccgttcgccccggacatgacgctcacccgggcgctggaggaatccgaggaactgcgg
acctcgcgcgaggatgaagaggtcggttatctgctcgatctggcgctgtcgctggaaggc
ctgagccgcaacgccggcaagcacgccggcggcgtggtcatcgcgccgtccaacctgatc
gatttcacgccgctgtactgcgagccgggtggcaccaaccgcgtcacccagttcgacaag
gacgatgtcgaggcggtcggcctggtcaagttcgactttctcggcctgcgcacgctcacc
atcatcgacaacgcggtccaggtcgccaacgcccgcctgaaaaaagccggcaaggggccg
atcgacgttcgccagatcccgctggacgacaaggcctcgttcgacctgctgcagaaaggc
gacaccacggccgtgttccagctggaatcgtccggcatgcggcgcctgatcaagcgcctg
cagccggccgagttcgaggacatcatcgccctggtcgcgctgtatcggccggggccgctg
gaatcgggcatggtcgaggacttcatcgaccgcaagcatggccgggccaaggtggtgtat
ccgcacaacagcctggccgaagtgctggagccgacctacggcgtcatcctgtaccaggaa
caggtgatgcagatcgcccaggtgctggcgggctacagcctgggcaacgccgacctgtta
cgtcgtgccatgggcaagaaaaagcccgaggaaatggccaagcagcgcgacggtttcgtc
aagggcgcggtcgcgaacaatatcgacgaggataccgccgcctatatcttcgatctggtc
gagaaattcgccggctacggtttcaataaatcgcactcggcggcctatgccctggtgtcc
taccagaccgcgtggctgaaggcgcattatccggccgacttcatgtcggcggtgttgtcg
gcggatatggatcacaccgacaaggtcgtgatcatgatcgacgagtgccaccggctcgcc
atcgaggtggcaccgcccaacgtcaacgcctccgaatacaacttctcggtggtcgacgat
acgaccatccgctatggcctgggcgcgatcaaggggttgggtaagggcgcgatcgaggcc
gtgatcgccgagcggcgcaaaggtggcgccttcgtgaacctatacgacttctgtcgccgg
gtggatacctcgaagatcaaccggcgtgcgatcgaggccctgatcaacgccggtgcgctg
gatgatctcggccccaaccgggccagcctgatgcacggcgtcacgcgtgcgttggcggct
gcggaacaggaccgcgcagccagccgcgtcggccagaacgacatgttcggcctggccgag
acgccggacaccgccgggccgccgctcgatcatctcgacgaatggccggaggacgagcgg
ctcaaggccgagcgcgatacgctgggcctgtatctgaccgggcatccgatcaaggcctgg
gaggccgagctcgaacgcatgaccgacggcaagatcgccgatcaggtcgcggccatgccc
cggccggaagagggcggcgagggccgccgcagcccgcgcaaggccgcggtggtcgccggg
ctcgtggtcgaggtccggcgcatgaagaagggcaagcggatcatcgtcgtgctggacgac
ggctccggacgcatcgaatgccccctgttcgaggacaaggccgccgaattcggccatctg
ctggtctcggacaagctcgtgatcgtcgacggcagcctgcagtacgacgacttctccgac
ggcttccggctcaatgccaacacggtcatggacatggagaccgcgcgcgcggcctatgcc
agccgcatcctgctgcagctgcagtccgaggccgcgctggatgtcggcgcactcgccggc
tgcgtggatcgctacaaggccgatgccggctgcgatgtcgtgttgcgttacgccaacgca
caggcccgcgcggtgctgactttgggcgatacccggctgcgcctgtgcgaggcgttgttg
accgatctgaagagtcttgtgggtgcggataaagtacaagtacgttatcgtcgcgcacag
acgagcgtaagctga
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