Salvelinus sp. IW2-2015 (Arctic char): 111954188
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Entry
111954188 CDS
T05762
Name
(RefSeq) thyrotropin receptor
KO
K04249
thyrotropin receptor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111954188
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
salp04030
]
111954188
G protein-coupled receptors [BR:
salp04030
]
Rhodopsin family
Peptide
Thyrotropin
111954188
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_4
7TM_GPCR_Srsx
Comm
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
111954188
NCBI-ProteinID:
XP_023829482
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Position
LG28:21066758..21097959
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AA seq
819 aa
AA seq
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MTENDRHRLQVITCALFTLVTLPIKTLGDTDSCPTVCECSEWKTYTISCFDIDVIPTFPT
STETIWLLETRLTSVPGDVFSNLVNISRIYISVDVTLAGLERHSFYNLKKITHIEIRNAK
SLSYIDPEAFKNLPNLKYLGIFNTGLTIFPDLTNIHSDDMNFILEIADHPYISEVPANSF
RGITNQVLTVMLYSNGFTDIQHHAFNGTKLDAVYLHRNKRLTKMDERTFAGTVSGPMLLD
VSLTGVSSLPTAGLESLRELMARNAWNLKKLPPIKTFKHLVTADLTYPSLCCGFKNLKKK
RGYLEYIICNLTAFYDQHQKRSVGPLRVPSLQVDPASDTAADRHQKRSVGPLTVPSLQED
PIGDAADPQPSEVGFRDGVFRDTQGDPRRDFQSSLHYHAYFGGQPDDDVGFGETLKNPQE
DTSQDFDSRYDYVVCEEGEEVTCAPAPDEFNPCEDIMGFSFLRVSVWFVSLLAVVGNMVA
LLVLLTSHYKLSVSRFLMCHLAFADLCMGIYLLLIASVDLHTRAEYYNQAIDWQTGPGCG
LAGFFTVFASELSVYTLTVITLERWYAITFAMRLDRKLRLPHAAAVMLAGWLFCLLLAML
PLVGVSSYQKVSICLPMDTQSTVAQVYIVSVLILNILAFLVICACYIKIYCTVHNPHYRS
GSKDTNIAKRMAVLIFTDFLCMAPISFYAMSAVLDRPLITVSNSKILLVLFYPLNSCANP
FLYAIFTKAFRGDVFILLSKVGLCQRRAQLFRGQTVSSKGSSGVCHQVRRGKKRDKNEKG
TGGPEEVPIHLQDRSGSGQTYLQPTSQQPSPEENCSLYT
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaacgaccgacaccgcttgcaggtgataacatgtgcgctgtttaccctcgtc
acgttacctatcaaaactttgggggacaccgactcctgccccactgtttgcgaatgctca
gagtggaagacttacactatctcttgctttgacattgatgtcattcccacatttcctaca
agcacagagacaatatggcttctggagacgcgtctgacatcagtgccaggagatgttttc
tccaacctggtcaacatctcaaggatatacatatcagtggacgtaacactggcaggactt
gagaggcattccttctacaatctaaagaaaatcacccacatagagatccggaacgcaaag
agtctgtcgtacatcgacccagaagcatttaagaaccttccaaacctgaaatacctgggg
attttcaatactggcctcaccatctttcctgatctcaccaacattcactcagatgatatg
aactttatacttgaaatagctgatcatccatacatatctgaggtcccagcaaactcattc
cgtggtattaccaaccaagtgctgacggtgatgttgtacagtaatggcttcaccgacatt
caacatcatgctttcaacgggaccaaactggatgctgtgtacctccataggaacaagcgt
ctgaccaagatggatgaaagaacatttgctggcactgttagtggcccaatgcttcttgac
gtgtccctgacgggggtgtcgtccctccccacagcaggcctggaatctctcagggagctg
atggcccgcaacgcctggaacctgaagaagctcccgccaatcaaaaccttcaaacacctg
gttaccgcagacctcacctacccctccctgtgctgcggcttcaagaacctcaagaagaag
agaggataccttgagtacatcatctgcaacctgacagctttctacgaccagcatcaaaag
agatcagtaggtcccctcagagtcccatctcttcaagtagacccagcatcggacactgca
gcagaccggcaccagaaaagatccgtgggtcccctcacagtcccatccctccaagaggat
cccattggggatgcagctgacccgcagcccagcgaggtgggcttcagagatggggtgttc
agagacacccagggagatccccggagagacttccaaagcagcctccactaccacgcttac
ttcgggggccagccggatgatgacgtgggcttcggggagacactgaagaacccccaggag
gacaccagccaggacttcgacagtcgctacgactacgtggtctgtgaggagggcgaggag
gtgacctgcgcccctgcgccggacgagttcaacccgtgcgaggacatcatgggcttcagc
ttcctgcgggtgtctgtgtggttcgtgtccctactggctgttgtaggcaacatggtggca
cttctagtcctcctcacctctcactacaagctctccgtctcccgcttcctcatgtgtcac
ctggccttcgctgacctctgcatggggatatatctcctcctcatcgcctctgtggatctt
cacacccgggcagagtactacaaccargccatcgactggcagacagggccgggctgcggg
ttagcggggttctttaccgtgtttgccagcgaactgtcggtgtatacgctgacggtgatc
acgctagagaggtggtatgcgataacgttcgccatgaggctggacaggaagttgcgtctg
ccccatgcagctgctgtgatgctggctggatggttgttctgcctcctcctagcgatgctc
cccctagtgggggtragtagttaccagaaggtcagtatctgcctacccatggacacgcag
tccaccgtggcccaggtgtacattgtctcagtccttatcctcaacatcctggcatttctg
gtkatctgtgcctgttacatcaagatctactgcactgtccacaacccgcactaccggtcc
ggctccaaagacaccaacatcgccaaacgcatggccgtccttatcttcacggacttcctg
tgtatggcgcccatctctttctacgccatgtcggcggttctggaccggcctctcatcact
gtatccaactccaagatcctgctggtgctcttctaccctctcaactcctgtgccaacccc
ttcctgtacgccatcttcaccaaggccttcaggggggatgtctttatcctgctcagtaag
gtggggttgtgccagcgccgggcacagctcttcagagggcagacggtcagttcgaagggt
agcagtggggtatgtcaccaggtccggagaggtaagaagagagacaaaaacgagaaggga
acaggaggaccagaggaggtacccatccacctgcaggatcgttctgggtctggtcaaacc
tacctccaacccacctcccagcaacccagtccggaggagaactgtagcctgtacacatga
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