Salvelinus sp. IW2-2015 (Arctic char): 111956223
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Entry
111956223 CDS
T05762
Name
(RefSeq) sal-like protein 3
KO
K19871
sal-like protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111956223
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111956223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_11
zf-C2H2_2
zf-Di19
zf-H2C2_5
IZUMO
DUF2225
Rad50_zn_hook
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
111956223
NCBI-ProteinID:
XP_023832446
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Position
LG31:complement(4715674..4728251)
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AA seq
1274 aa
AA seq
DB search
MSRRKQAKPQHLKLDEEALQTDVATEHALLEGMDXEERRRGIEEAHVRKQIAEYFTWAEL
YEHQRSCTEDLPQVLIVKEDEGIPEPEGSPAGSSPTLSLAILNLAHSDSADMXSVDGGLE
LVEPMNYNDNDSTDMLEEMNMGEKEDESMEVEQQHHDKYKSSSPQNPPDITELAIPSSQS
SSVTSSMPSTNVTLEILHSTRVAVAQFSQSLHSSGAGGKAATAAIPVILEHLLALQQQQV
HQLQLIEQIRSQVAFMNRQPTQTALNPVSRALSLAPNPFPSQGLIAPPVLPLSGTIPSAV
NGQASVSSASVLERSHTLSKQTSYGQAHMRDARCTSAPSDNSAPPPTSCNNISSLHPPYM
GSYSHTSSSCTQTLTSSSPLSMQDQSNSLLSSPSSLPFLPQSPPSSVIFPNPLASIAATT
NALDPLSALMKHHRNGKLPSVSMFDTKPSPEEPFFKHKCRFCAKVFGSDSALQIHLRSHT
GERPFKCNLCGNRFSTKGNLKVHFQRHKEKYPHVQMNPYPVPEYLDNVPTSSGIPYGMSF
PPEKTGATWLDSKPVSATVPTSMGIQLPFTLTTMGSSSGSLSVTPPIKSPFGPSPALSEC
VSLSLNTTGNETSVPTALESPQSNQEGESSHVLKAEEIHLPQNWMTRPRVSPFTVATSKA
MTITTSTPEPSALTSNFLPLSLASDPFKAKFPFGGLLDSMQTSETSKLQQLVENIDKKIT
DPNQCVLCHRVLSCQSALKMHYRIHTGERPFRCKVCGRAFTTKGNLNTHIGVHRANPPLR
VQHSCPICQRKFTNAVVLQQHIRMHMGGQISNSPLMDGLQDLDTDLSFHEKNFDSLKNYD
NDLMFDNSMGEEEXDEEEEEVDNMEGGVDTLKPLSSVFSSPPNSDAVVFSIAALENQMKM
IDSTINLNHSFGLKSMMNGFMDSERRVAIHSSIVGEGQNHNAASSPTVSESSTCMHVPVS
PAQSNSEVHLCNSPSGKHSGESQEIKASVKSEEFDSPTSTPVLENGVTLDLRGMQPNRQC
VKQESPYSTLFLSKERGSSQSIPSLITSIAPRMIKSEMNGHHRPTNFNEGLHHPFGLQVP
AAPPSLVSPGITSLLRPPHLRRTPKQHNCHACGKNFSSASALQIHERTHTGEKPFGCSIC
GRAFTTKGNLKVHMGTHMWNNAPARRGRRLSVENPMALLGGEAAMKFGEMFQKDLTERAM
NVDPGFWNRYASAITNGLAMKKNEISVIQNGGILQLYPMTAGMDRVSTGGSPPMTSLGKT
AMDLGINRPDTFLC
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccgcaagcaagcgaagccacaacatctcaaattggacgaagaagcgttgcaa
actgacgtcgccacagaacatgctctattggagggaatggatgasgaggagcgccgccgt
ggcattgaggaagcgcacgtgcgtaaacaaattgctgagtacttcacctgggccgaactg
tatgagcaccagagaagctgcacagaggacctacctcaggtcctcattgtgaaggaagat
gaggggatccctgaacctgaggggtccccagctggatcctctccaaccctcagcctggcc
attcttaacctggcccacagtgactcagcagacatggrgtcagtggacgggggcctcgaa
ctggtggagcctatgaattataatgataatgacagcacagatatgttagaggagatgaac
atgggggagaaggaggatgaatccatggaggtggagcagcagcaccacgacaaatataag
tcatctagcccccagaatcccccagacataactgagttggccatcccttcatctcagtcg
tcctctgtgaccagcagcatgcccagtacgaacgtaacgctggagatcctccacagtacc
cgggtggctgttgcccagttctcccagagcctccacagtagtggggcaggagggaaggcg
gccacagcggccatcccagtgatcctagagcacctgctggctttgcagcagcaacaggtc
caccagttgcagcttattgagcagatccgtagccaggtggccttcatgaacagacagccc
acacaaacagcactaaacccagtctccagggccctttcactggcaccaaaccctttcccc
tcccaaggcctcatcgctccccctgtcctaccactgtctgggaccataccctctgctgtc
aatggacaagcgtctgtgtcttcggcatctgtgcttgaaagatcccacacactctccaaa
caaacttcatatggacaggcccacatgagagatgctagatgtacctcagctccctcggac
aactctgcccctccccctactagctgcaacaatatttcctcattacatcctccctacatg
ggttcatactcacacacaagcagtagctgtactcagaccctgacctcgtccagcccactc
tccatgcaggatcagagcaacagtctcctcagctcaccatccagcctgccgtttctacct
cagagcccccccagcagtgtcatcttccccaaccccctggccagcatcgcagccacgact
aatgccctcgaccccctttccgccctgatgaagcaccaccggaatggcaagctgcccagt
gtgtccatgttcgacaccaagcccagccctgaggagccctttttcaaacataagtgcagg
ttctgcgccaaagtgtttggcagcgacagcgcgctgcagatccacctgcgctctcacacc
ggggagaggcccttcaagtgcaacctctgcggcaatcgcttctccactaaagggaacctg
aaagtccacttccagagacacaaagaaaagtatccccatgttcagatgaacccttatcca
gtgccggaatatttagacaatgtgccaacgagctctggtattccctatggcatgtcattc
cctcctgaaaaaacaggagccacttggctggatagcaagcctgtttcagcgacggtaccc
acctctatgggcattcagcttcccttcactctcactactatgggaagctcaagtggatct
ctaagtgtcacaccacccatcaaatctccttttgggccctccccagccttaagtgaatgt
gtgtctttgtcgctgaacactacaggcaatgaaaccagtgttcccacagctttagagtct
ccacagtctaatcaggagggggaatcctcccatgtcttgaaagcagaggaaatccatctg
ccccaaaactggatgactagacccagggtgagtccatttactgtggcaacaagtaaagcc
atgactattaccacatccacacccgagcccagtgctttgacttccaactttctaccactt
tccctggcctctgacccgttcaaagcaaagtttccattcggtggcctcctggactctatg
caaacgtcagagacctcaaagctccagcagctggtggagaacatagacaagaagataaca
gaccccaaccagtgtgtcctttgtcaccgcgtgctcagctgccaaagcgcgctgaagatg
cactaccgtatccacactggggagaggccctttagatgtaaggtgtgtggcagggctttc
accaccaaaggaaacctgaatacacacattggtgtccacagagcaaaccctcctctccgg
gttcaacattcatgccccatctgccagaggaagttcaccaacgctgtagtgctacagcag
cacatccgcatgcacatggggggtcagatctcaaactcgcccttgatggacggcctacag
gacctcgacactgatctctccttccacgagaagaactttgacagcctgaaaaactatgac
aatgacctcatgtttgacaactccatgggggaggaagaggakgatgaagaagaagaagag
gtagacaatatggaggggggtgtagatacccttaaacccctgagctctgtctttagttct
cctcccaactctgatgctgttgtcttcagcatagctgcactggagaaccaaatgaaaatg
atagactccaccataaacctaaaccactcctttgggctaaagtcaatgatgaatggtttt
atggacagtgaacgccgcgttgctatccactcctctatagtgggagaaggacagaatcac
aatgcagccagcagcccaaccgtgtctgaatcgtccacgtgtatgcatgtaccagtgtca
cctgcgcaaagcaattcggaggtccacctctgcaattccccatctgggaagcacagtgga
gagtcccaagagatcaaagcctcagtgaagagtgaggaatttgattcgcccacctcaact
ccggtactggaaaatggagtgactttggatctgagagggatgcaacctaacaggcagtgt
gtgaaacaggagagtccttacagtacgctgttcctgagtaaagaacgtggttccagccaa
agcattcctagcctgattaccagcattgcgccaaggatgatcaaatctgaaatgaatggg
caccatcgaccaacgaacttcaacgaggggctgcatcatccattcggcctccaggtccct
gctgctcctccatctctggtgagcccaggaatcacctctctgcttaggccacctcacctt
cgacggaccccgaagcaacacaactgccatgcatgtgggaagaacttctcctcagccagc
gctctacagatccatgagcggacccacacaggggagaaacctttcggttgctccatctgt
ggcagggcattcacaactaaaggaaacctgaaggtacacatgggcactcatatgtggaac
aacgcaccagccagaagaggcaggcgtctgtcggtggagaaccccatggccttgctgggt
ggggaagctgccatgaagttcggagagatgtttcagaaggacctgacggaacgggccatg
aacgtggacccagggttctggaaccgctacgcatcagctataaccaacggcctagccatg
aagaagaatgagatctcagtgatccagaatggggggattctacagctttatcccatgacg
gcaggcatggacagagtcagcactgggggtagcccaccaatgaccagtcttggaaagaca
gccatggaccttggaattaacagacccgacacttttctatgttaa
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