Salvelinus sp. IW2-2015 (Arctic char): 111960485
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Entry
111960485 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: ARF GTPase-activating protein GIT1-like
KO
K05737
G protein-coupled receptor kinase interactor 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
salp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111960485
09142 Cell motility
04810 Regulation of actin cytoskeleton
111960485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111960485
Membrane trafficking [BR:
salp04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
111960485
Endosome - Golgi transport
Arf GTPase associated proteins
111960485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
ArfGap
GIT_SHD
Ank_2
Ank_4
Ank
Ank_5
Shugoshin_N
TTRAP
T7SS_ESX_EspC
Motif
Other DBs
NCBI-GeneID:
111960485
NCBI-ProteinID:
XP_023838250
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Position
LG4p:complement(10811245..10838669)
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AA seq
766 aa
AA seq
DB search
MSRKVHRTEVCADCSAPDPGWTSINRGVLICDECCSVHRSLGRHISIVKHLRHSGWPPAL
LQMVQTLASNGANSIWEHSLLDPAQVQSGRRKPNPQDKVHPTKSEFIRAKYQMLSFVHKL
PCRDDDGVTTKDLSKQLHSSVRTGSLETCLRLLSLGAQANFFHPEKGTTPLHVAAKAGQV
LQAELLVVYGADPGALDINGRTPMDYARQAGQVELAERLVECQYELTDRLAFYLCGRRPD
HKNGHYIIPQMADSLDLSELAKAAKKKLQALNNRLFEELAMDVYDEVDRRENDAVWLTTQ
NHSTLVTERSAVPFLPVNPEYSATRNQGRQKLARFNAREFATLIIDILSDAKRRQQGKGP
MLLLXSIPVDSSLDLGADDDQHDYDSVASDEDTDSELTTQNNNNTQRNNRAKSMDSSDLS
DGPITLQEYLEVKKALASSEAKVQQLMKVNNNLSEELRRLQKEISRMQTENSALRGGQVI
GGGGAGGLGGGGGGSPAHWQGGVRGGGGGGRGGDHSSLAMSSAPAHRRDRQAFSMYEPGP
ATPKPHSHSPGLDSLTGRLQPLHPSVRKGGPGGPTPYGGQHLSSSMEMGRYMVPKGEKHG
SGTDSDYDNTQMYELSLSRGRSSEEEGRGESEEWEGGEPDPTLPCTEDVILKTEQVTKNI
QELLRAAQEFKHDSFVPCSEKIHSAVTEMASLFPKRPALDAVHCSLRLLASSASRLQVEC
RKAAPPDPSAPAVDYQLLTQQVIQCAYDIAKAAKQLVTITTREKKQ
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaaaggtccacagaaccgaagtatgcgccgactgcagtgcaccagatccgggc
tggaccagcatcaacaggggcgttctgatctgtgacgagtgctgctcggtgcaccgtagc
ctggggcgccacatctccatcgtcaagcacctgcggcacagcggctggccccctgcactg
ctgcagatggtgcagaccctggccagtaatggggctaactcgatttgggagcactctctg
cttgacccagcacaggtgcagagcggccgcaggaaacccaacccacaggacaaagtccac
cccaccaagtccgagttcatccgcgccaagtaccagatgctatccttcgtccacaagctg
ccgtgccgcgatgacgacggtgttaccaccaaggacctcagtaagcaactgcactccagt
gtgaggacggggagtctggagacatgtctacggctgctgtccctgggagcacaggccaac
ttcttccacccggagaagggcaccactccactccacgtggcagccaaggcaggccaggtt
ctgcaggcagagctgctggtcgtgtacggagccgaccccggagccctggacatcaacgga
cgcacacccatggactacgccaggcaagcgggccaggtggagctggcagagcggctggtt
gagtgtcagtacgagctcacagacaggctggctttctacctgtgtggccgacgccctgat
cacaagaatgggcattatatcattcctcagatggctgacagcctggacctctcagaactg
gccaaggcagctaagaagaagctccaagcgctgaacaatcgattgtttgaggagctggcc
atggatgtgtatgacgaagtggaccgcagggagaacgatgcagtgtggctgacgactcag
aaccacagtactctggtgacggagcgcagcgcggtgcccttcctgcctgtcaaccccgaa
tactcagccacacgcaaccagggtagacagaagttggcccgtttcaacgctcgtgagttc
gcaacgctaatcatcgacatcctgagtgacgccaagaggaggcaacaggggaaagggcct
atgttgttgctctgatccatccctgtagactctagtctggacctgggggccgacgacgac
cagcatgactacgacagcgtagcgtcggacgaggacacggacagcgagttgaccactcag
aacaacaacaacacgcagcgcaacaaccgggccaagagcatggactcgtcggacctgtcg
gacgggcccatcactctgcaggagtacctggaggttaagaaggccctggcctcctccgag
gctaaagtccagcagctgatgaaggtcaacaacaacctgagtgaagagctgcgccggctg
cagaaagagatctcgcggatgcagacggagaacagtgcgttgcgggggggccaggtcatc
ggaggagggggagctggcggtttgggaggcgggggaggaggcagcccggcacattggcaa
gggggggtgagaggcggcggagggggaggtaggggaggggaccactccagcctagccatg
tcctcggcgcccgcccaccggagggacagacaggctttctctatgtacgagccggggccc
gccacccccaagccccactcccactccccgggcctggactccttgacgggccgcctgcag
cctctgcaccccagtgtgaggaaggggggtcctggcggtccaacaccctatggaggacag
cacctctctagctccatggagatggggagatacatggtccctaaaggagagaagcacggc
agtggcactgatagtgactatgacaacactcagatgtatgagctgtcgctaagtaggggg
cgcagcagtgaagaggagggccggggggagtcggaggagtgggaggggggtgagccggat
cctaccctgccgtgcacagaagacgtgatcctcaagacggagcaggtgaccaaaaacatc
caggagcttctgagggccgcacaggagttcaaacacgacagtttcgttccatgctctgag
aagatccactctgctgtcactgaaatggcctctctctttcccaagcggcccgccctagac
gccgtgcactgctccctgcgcctcctggcgtccagcgcctcccgcctccaggtggagtgt
cgcaaggcggcacccccggacccgtcagcgcccgccgtcgactaccagctgctcacccag
caggtcatccagtgcgcctatgacatcgccaaagccgccaagcaactggtcaccatcacc
acccgcgagaagaaacagtga
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