Salvelinus sp. IW2-2015 (Arctic char): 111960828
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Entry
111960828 CDS
T05762
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1B-like
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111960828
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111960828
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HHH_3
Peptidase_U4
T2SSK
Motif
Other DBs
NCBI-GeneID:
111960828
NCBI-ProteinID:
XP_023838781
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All DBs
Position
LG4q.1:29:13900261..13906401
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AA seq
338 aa
AA seq
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MRGMNSVVLDSESDEEISGSSMMLLGDPARKRRLEVCNSSQESGASNSSKKPALQEDLVC
EGTDPLVFQEASPVELSLISGCSVKKARRIVELRPFNEWENLVAVLDRGNGLSTDLVQGC
CVVLREQDVARSLLTKCENITNKMMQDVTQVVERDKGFQKQPEILNSKFQLKPYQLIGQN
WLTLLYQNNLSGILTDEMGLGEDHPGHLFSVFLLKQGTTKLRHIVKIPRYHGNRVNCTNA
RLSRLQSAISSFFIHNRRLYGSVEDRRFLRYDILHKWVDYNIIISRQVASAADVDPSAEQ
PPGAHVTAQLHHAQYVLQQHCTACQHVCHEIYRGAEQL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcatgaacagtgtggtactagactctgaatcagatgaggagatatctgggtca
tccatgatgttgttgggagacccagcccgtaagaggagactagaggtgtgtaacagctcc
caggagagtggggcatccaactccagcaagaaaccagccctccaggaagatttagtttgt
gaagggacagatcctctggttttccaggaggcatcgccggttgagctgtctctcatctct
ggctgctctgtgaagaaggcccggaggattgtcgagctgcgcccatttaacgagtgggag
aatctggtggctgttctcgacagagggaacggcctctccactgacctggtgcagggctgt
tgtgtggtcctgagggaacaggacgtggcgcgcagcctcttgaccaagtgtgagaacatc
accaacaagatgatgcaggacgtgactcaagtggtggagagggacaagggcttccagaaa
cagcctgagatcctcaacagcaagttccagttgaagccttatcagctaattggtcaaaat
tggctgactctgctataccagaacaacctgagtggaatccttactgatgaaatgggtttg
ggggaagaccatccaggccatctcttttctgttttcttgttaaagcaaggaacaacaaag
ttacgtcacattgtaaagattccacgttaccatggaaacagagtcaactgcacgaatgcc
cggctgtcccgtcttcaatcagctattagttcgttcttcatccataatcgtcggttatat
gggtctgtggaggatcgcaggttccttcgatatgatattctccacaaatgggtcgactac
aacataataatttcccgccaagtagcatctgctgctgacgtggaccccagtgcagaacaa
cctcctggagctcatgtcactgctcaacttcatcatgcccaatatgttctccagcagcac
tgcacagcttgccaacatgtttgtcatgaaatctacagaggagcagagcagctttga
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