Salvelinus sp. IW2-2015 (Arctic char): 111962087
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Entry
111962087 CDS
T05762
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-7 isoform X1
KO
K04809
nicotinic acetylcholine receptor alpha-7
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111962087
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111962087
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111962087
Ion channels [BR:
salp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
111962087
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SUR7
DUF2417
Motif
Other DBs
NCBI-GeneID:
111962087
NCBI-ProteinID:
XP_023840673
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Position
LG4q.1:29:49623724..49650001
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AA seq
519 aa
AA seq
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MSVSLTCVCVCFCGHEWPLVSLQGQHQRRLYKDLMRNYNPLERPVFNDSHSLTVHFSFSL
MQIMDVDEKNQVLTTNIWLQLYWTDYYLQWNTTDYPGVTNVRFPDTQIWRPDILLYNSAD
ERFDATFHTNVLVNSTGYCQYLPPGIFKSTCYIDVRWFPFDVQRCDLKFGSWTYGGWSLD
LQMIEADVTGYIANGEWDLVEVPGRRNERFYDCCKEPYPDVTFTVVMRRRTLYYGLNLLI
PCVLISTLALLVFLLPADSGEKISLGITVLLSLTVFMLLVAEIMPATSDSVPLIAQYFAT
TMVIVGLSVIATVLVLQYHHHDPDGAKMPKWTRVVLLNWCAWFLRMKRPGEERVRLACHN
KHPRNSLSSVELSMSQGTLQPTNGNMLYIGFRGMEGMHYTTTPDSGVICSRLVGAGDEEV
LLPGAGLPNLGSVAGGTGVGVASPVDSDMSKILEEVRYIAKRFRGQDEDESLCNEWKFAA
SVIDRLCLMAFSVFTILCTIGILMSAPNFVEAISKDFFT
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgtctttgacatgtgtgtgtgtgtgtttttgcgggcatgaatggcccctagtg
tctctacagggacagcaccagcgcagactgtacaaggacctgatgcgaaactacaaccct
ctggagcgtcccgtgttcaacgactcccactcgctcaccgtacacttcagcttcagcctc
atgcagatcatggatgtggatgagaagaaccaggtcctgacgaccaacatctggttacag
ctgtactggactgactactacctgcagtggaacaccacagactaccctggagttaccaat
gtcaggttccctgacacccagatatggaggcctgacattctcctctacaacagcgctgac
gagaggtttgacgccaccttccacaccaacgtcctagtcaactccactggctactgccag
tatctccccccaggaatcttcaagagcacatgctacatcgacgtgcgctggtttcccttc
gatgtccagcgctgtgacctcaagtttggctcgtggacgtacgggggctggtctttagac
ctgcagatgattgaggcggatgtgactggatacattgctaatggagagtgggacctcgtg
gaggtccccggacggaggaacgagcgtttctatgactgctgtaaggagccttaccctgac
gtgaccttcacggtggtgatgcgtagacgcaccctctactacggcctcaacctgctcatc
ccctgtgtcctcatctccaccctggccctgctcgtcttcctgctgcccgcggactctgga
gagaagatctcactgggtatcactgtgctgctctctctaactgtcttcatgctcctggta
gctgaaatcatgccggccacctctgactctgttcctctcatagcccagtactttgccacc
accatggtcatcgtgggcctgtccgtcatcgccactgtcctggtcctccagtaccaccat
catgacccggacggagccaaaatgccaaagtggacacgtgtggtgctcctgaactggtgc
gcatggttcctgcgtatgaagcggcccggcgaggagcgtgtgcgtctggcctgccacaac
aagcatccgcgcaacagcctctccagtgtggagctcagtatgagccaggggaccctccag
cccaccaatggcaacatgctctacatcggcttccggggcatggagggcatgcactacacc
accacccccgactcaggcgtcatctgctccaggctggtgggggcaggggacgaggaggtg
ctgctacccggggccgggctgcccaacttgggcagcgtggcaggcggcaccggggtgggg
gtggcgagccccgtggactccgacatgtccaagatcctggaggaggtgcgctacatcgcc
aagcgcttccggggccaggacgaggacgagtcgctgtgcaatgagtggaagtttgcggcg
tctgtgattgaccggctgtgcctgatggcgttctctgtgttcaccatcctctgcaccatc
ggcatcctcatgtcagcgccaaacttcgtggaggccatctccaaagacttcttcacctga
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