KEGG   Salvelinus alpinus (Arctic char): 111964582Help
Entry
111964582         CDS       T05762                                 

Gene name
setdb1
Definition
(RefSeq) histone-lysine N-methyltransferase SETDB1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
salp  Salvelinus alpinus (Arctic char)
Pathway
salp00310  Lysine degradation
Brite
KEGG Orthology (KO) [BR:salp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    111964582 (setdb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:salp03036]
    111964582 (setdb1)
Enzymes [BR:salp01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     111964582 (setdb1)
Chromosome and associated proteins [BR:salp03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     111964582 (setdb1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111964582 (setdb1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Tudor_4 DUF5604 TUDOR_5 Pre-SET MBD DUF4537
Motif
Other DBs
NCBI-GeneID: 111964582
NCBI-ProteinID: XP_023844197
LinkDB All DBs
AA seq 1340 aa AA seqDB search
MDNNDGMEVEGWDSGLEEELGVSLEELSKWIEEEVERSEAVRQRKAQLAELKEWVEQKEK
EEEVVDKLFNNANQSIVECEALVKSTYSKMGLVYKESSSEDEGGVGGVQSSDVIEIEDDD
DDDDVIAVGLLVPPKKPGIPVQDAMFKEASAALQRSSQQVLKLAQTVNKNSSSGPAIQQP
GGPVPMPAVFVSQATPRNTPTQPNPSLKDDEIRLEMSLLGKKRTKTWHSGMLIAINPVGN
GYSKYKVKFENKGKSLLSGNHIAFHYHPTLERLYVGARVVAKYKDGNQVWLYAGIVAEMP
NNKNRMRFLIFFDDGYASYVTLPELYPVCRPMKRTWEDIEDASCKDFIEEYITSYPNRPM
VLLKAGQVIKTEWEGTWWRSRVEEVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNLKTNC
ANTQEKKMAGQQRTRPSMGALRTKGPVVQYHSGGNTTTPGGTPTKSPHPLSPPSSIPPTP
SQPNQLARTDPKYQMAKKSTSPYIPTPGGSRTGLASNSHAPKAMQPQPSTGSPGNSSRMY
VLQTGNIQTLTSLQPIQHQQQSLPPPPQAPPTAPAPAVTPYTFSNDRIPHEPSYRAPTDR
IFYLPHTCQHACLNRIRPSRPDMHRGRNPLLTPLLYEFRRMTGRRRVNRKMSFHVIYKSP
CGLCLRSMAEIQRYLFQTHCDFIFLEMFCLDPYVLVDRRFQPQKPYYYIRDITNGREDIP
LSCVNEIDITPPPDVAYSKERIPEDGVFINTSPEFLVGCDCIDGCRDKSKCWCHQLTLQA
TACTPGAQINHTAGYTQKRLEECLPTGIYECNKRCKCCSQMCTNRLVQHGLQVRLQLFKT
QNKGWGIRCLDDVAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGY
ESEAHCSDSDGSGVDMSRLKNPPSSSLALQNKTLPKPPQRTNAANPAGKARGAGGDSSKD
GDSDEESNNDKSSDDTFVKDPYYSSSSVWRSYTTRRQAKGVKEGSQDSKDGMSVSVGGKE
DRKPPPMPEESGKSKVASWLTNQPSTSQATVKMEGLKIEKKEPGDQKSQQSVKTEGGKRQ
DVMTLSDSDDVQTISSGSDDNKWEEEIGGGGTMGEGGEVGVEGAGGKKKNGGRGKQVRRG
GSWGCGFIDLCVLSGITRPVHVVLLPELTLSLLPFILLSSLSLPPVSGAVKRQVAVKSTR
GIALKNSHGLMVKTGGAGMGPGGGPGGHGGAQGKGGDGGDSGPKNTRQFFDGEESCYIID
AKLEGNLGRYLNHSCSANLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGS
VEGKELLCCCGSTECRGRLL
NT seq 4023 nt NT seq  +upstreamnt  +downstreamnt
atggacaataatgatgggatggaggtggagggctgggactctggtctggaggaggaactg
ggtgtgtctctggaggagctgagtaagtggattgaggaggaggtggagaggagcgaggca
gtccgccagaggaaggcccagctggctgagctcaaagaatgggtggagcagaaagagaag
gaagaggaggtggtggacaaactcttcaacaatgccaaccagtccatagtggagtgtgag
gctctggtgaagtccacctacagtaaaatgggtctggtctacaaggagagctcttcagag
gatgagggtggagtgggaggggttcagtcctctgatgtcatagaaattgargatgatgat
gacgatgatgatgtcatcgctgtgggcttactggttccacccaagaaacctgggatacct
gtccaggatgcaatgtttaaggaggcgtctgcagctctccagcgttcctcccagcaggtg
ttgaagctggcccagacagtcaacaagaactcttcttctgggcctgctatacaacagcca
ggtggcccagtgcccatgccagcagtgtttgtgtcccaggccacgcccaggaacacaccc
acccagcctaacccctccctgaaggatgatgaaatcagactggagatgagtcttctggga
aagaaacgcaccaagacctggcacagcggaatgctcatcgccatcaaccctgtcggtaat
ggttacagtaagtacaaggtgaagtttgagaacaaggggaagagtctactgtctgggaac
cacatagcgtttcactatcaccccaccctggagaggctgtacgtgggagccagggtggtc
gccaagtacaaggacggcaaccaggtctggctctacgctggcatcgtggcagagatgccc
aacaacaagaaccgcatgaggttcctgatcttctttgacgacggttatgcctcctacgtg
accctgcctgagctctaccctgtctgcagaccaatgaagcgtacatgggaggacatagag
gatgcatcgtgtaaagacttcatagaggagtatataacgtcataccccaacaggcccatg
gtgctgctgaaggcaggccaggtcatcaagacagagtgggaggggacgtggtggaggagc
agagtggaggaggtggacggcagcctcgtcaagatcctcttcctggatgacaagcgtagt
gagtggatctaccgcggttcaaccaggctggagcccatgttcaacctgaagactaactgt
gccaacacccaggagaagaagatggctggccagcagaggacacgccccagcatgggagca
ttgaggaccaagggccccgtggtccagtatcacagtggggggaacaccacaacccccggc
gggacccccactaaatccccccatcccctctccccaccctcctccatccctcctacaccc
tcccagcccaatcagcttgcacgaacagatcctaagtatcagatggctaagaagagtact
tctccatacattcccacgccaggaggctctcgcactggattggccagtaatagccacgcc
cctaaagccatgcagccccaaccttcaactggttctcctggaaactcatccagaatgtat
gtccttcagactggcaacatccagactctcacgtccctacagcctatccaacaccagcag
cagtctctgccccctcctccccaagcccctcccaccgcccccgcacctgcagtgacccca
tacaccttcagtaacgaccggattccccacgagccctcgtaccgcgcccccacagaccgc
atcttctacctgcctcacacctgccagcatgcttgtctcaaccgtatccggccctccaga
ccagatatgcaccggggcaggaaccccctgctcacccctctactctacgagttcagacgc
atgacggggcgacggagagtcaaccgcaagatgtcgttccatgtgatctacaagtctcct
tgtgggctgtgtctgcgcagcatggcggagatccagcgctacctgttccagacgcactgt
gacttcatcttcctggagatgttctgcttggacccctatgtcctggtcgaccggcgcttc
cagccccagaagccttactactacattcgagacatcaccaacggccgcgaggacattccc
ctgtcctgcgtcaacgagatcgacatcacaccgccccccgacgtggcctacagtaaggag
cgtatccctgaagatggagtgttcatcaacaccagtccagagttcctggtgggctgtgac
tgtatcgacggctgcagggacaagtccaagtgttggtgtcaccagctgaccctgcaggcc
acagcctgtacccctggagcacagatcaaccacacagctggatacacacagaagagactg
gaggagtgtttgcccaccgggatttatgagtgtaataagcgttgtaagtgctgcagtcag
atgtgtactaaccgtctggtgcagcacggtctgcaggtgaggctgcagctctttaagacc
cagaacaaaggctggggcatccgctgtctggacgacgtggccaagggatccttcgtctgt
atctacgcaggtaagattctgacagatgactttgcggacaaggagggactggagatgggt
gatgagtactttgctaacctggaccacatagagagtgtggagaacttcaaggaagggtat
gagagtgaggcccactgttcagacagtgacgggagcggggtggacatgtccaggctgaag
aaccccccctcgtcctccctggctttgcagaacaagacccttcccaaacccccccagaga
accaatgctgccaaccctgctggcaaagcgcggggtgctggtggcgactcctctaaggat
ggggatagtgatgaagagtcgaacaacgacaaaagttcagacgacacgtttgtaaaggac
ccctactacagctccagctctgtgtggaggagctacaccacccgtcgccaggccaagggc
gtcaaggaagggagccaggacagtaaggatgggatgagtgtgtcagtggggggaaaggag
gacaggaagccgccccccatgccagaggagagtgggaagagtaaagtagcgtcctggctc
accaaccaaccctctacctcccaggccaccgttaagatggagggactgaagatagagaag
aaggagcccggagaccagaaaagtcaacaatcagtgaagacggagggagggaagaggcag
gatgtgatgacgctgtcggacagtgatgacgtccagaccatcagctctggatctgacgac
aacaaatgggaggaggaaattggagggggaggaacaatgggagaagggggagaggtaggg
gttgagggggcaggggggaagaagaagaatggggggaggggaaaacaggtgaggagaggg
ggaagttggggctgtgggttcatagatctctgtgttttatcaggtattaccagacctgtt
catgtggtgcttctccctgaattgaccctttctcttctccccttcatcctcctctcctcc
ctctccttgcctcctgtctcaggtgcggtgaagaggcaggtggctgtgaagtccacgcga
ggcattgctctaaagaactcccatggcctgatggtgaagactggaggggctgggatgggg
ccagggggaggcccggggggccacggaggggcacagggtaagggtggggacgggggagac
agtggacctaaaaacacacggcagttcttcgatggggaggagtcctgctacatcatcgac
gccaagctggagggcaacctgggacgctacctcaaccacagctgcagtgccaacctgttt
gtccagaatgtgtttgtagacacacacgatctgcgtttcccctgggtagccttcttcgcc
agcaagcgtatcagggcggggacagagttgacatgggactataactacgaggttggcagt
gtggagggaaaggagctactgtgctgctgtggctcaacagagtgcagaggaagactgcta
taa

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