Salvelinus sp. IW2-2015 (Arctic char): 111972868
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Entry
111972868 CDS
T05762
Name
(RefSeq) cullin-1
KO
K03347
cullin 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04110
Cell cycle
salp04114
Oocyte meiosis
salp04120
Ubiquitin mediated proteolysis
salp04141
Protein processing in endoplasmic reticulum
salp04310
Wnt signaling pathway
salp04340
Hedgehog signaling pathway
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111972868
04120 Ubiquitin mediated proteolysis
111972868
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111972868
04340 Hedgehog signaling pathway
111972868
04350 TGF-beta signaling pathway
111972868
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111972868
04114 Oocyte meiosis
111972868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111972868
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Cullin
111972868
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
IntS11_C
DUF4980
Motif
Other DBs
NCBI-GeneID:
111972868
NCBI-ProteinID:
XP_023855759
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Position
LG14:complement(32825557..32839256)
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AA seq
776 aa
AA seq
DB search
MSSNRGQNPHGLKQIGLDQIWDDLRAGIHQVYTRQSMAKSRYMELYTHVYNYCTSVHQSS
QGRGSAVPNKPSKKSSTPGGAQFVGLELYKRLKEFLKNYLTSLLMDGEDLMDECVLKFYT
QQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQVT
NAVLKLIEKERNGETINTRLISGVVQSYVELGLNEEDAFAKGPTLSVYKEYFECQFLTDT
ERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARRCEQVLIEKHL
EIFHTEFQNLLDADKNQDLGRMYNLVSRITDGLGELKKLLETHIHNQGLAAIEKCGEAAL
NDPKVYVQTTLNVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNTVTKMAQSSSKSPE
LLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSA
SDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQVL
SSGSWPFQQSCTFALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKNRYT
LQASTFQMAILLQYNTEDLYSVQQLTDSTQIKTDILVQVLQILLKSKLLVLEDENANIDE
VEFKPETLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMK
MRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccaacaggggccagaacccacatgggctgaagcagatcgggctggaccagatc
tgggacgacctgagggctggcatccaccaggtgtacacacggcagagcatggcgaagtca
cgctacatggagctctacacccatgtgtataactactgtaccagcgtgcaccagtccagt
caaggccgggggtctgccgtccccaacaagccctccaagaagagcagtactcctgggggg
gcccagttcgtaggcctggaactctacaagagactcaaggagttcctcaagaactacctg
accagtctgctcatggatggtgaggacctgatggatgagtgtgtgttgaagttctacaca
cagcagtgggaggattaccggttctccagtaaggtgctgaatgggatctgtgcttacctc
aacaggcactgggtcagacgtgaatgtgatgagggacgcaagggcatctacgagatctac
tcgttggcgttggtaacgtggagggagtgtctattcagacccctaaacaaacaggtaacg
aatgcggtcctgaagctgatcgagaaggagaggaatggagagaccatcaacaccagactc
atcagtggtgtggtgcagtcctacgtggagctggggctgaatgaggaggatgcgtttgct
aagggtcctacgctgtcagtgtataaagaatactttgagtgccagttcctcacggacact
gaacgcttctacacacgagagagcaccgagttcctccaacagaaccctgttactgagtat
atgaagaaggccgaggcccgtctgctagaggaacagaggcgtgtgcaggtgtacctccat
gagtccactcaggatgagctggccaggcggtgtgaacaggtgctcatagagaaacacctg
gagatcttccacacagagttccagaatctactggatgctgacaagaaccaagatctaggt
cggatgtataacttggtgtctcgtataacggatggcctgggagagctaaagaaactccta
gaaacacacatccacaaccagggcctggccgctatagagaaatgtggggaggccgctctc
aacgaccctaaggtgtatgtccagaccacactgaacgtccataagaagtacaacgctctg
gtcatgtctgccttcaacaacgacgctggcttcgtagctgctctagacaaggcgtgtggt
cgtttcatcaacaacaacacggtcactaagatggcccagtcctccagcaaatcacctgaa
ctactggctagatactgtgactctctgctcaagaagagttctaagaacccagaagaggca
gagttggaggacacactcaaccaagtgatggtggtgtttaagtacatagaggacaaggat
gtgttccagaagttctatgctaagatgctggctaaacgcctcgtccaccagaacagtgct
agcgacgacgcagaggctagcatgatctccaaactcaagcaagcgtgtggctttgagtac
acatctaaactacagaggatgttccaggacatcggagtcagcaaagacctcaacgaacag
ttcaagaaacacctgaccaactctgaacctctcgacttggacttcagtatccaggtgttg
agttccgggtcctggccgttccagcaatcatgcactttcgctctgccctccgagttggag
cgtagctaccagcggttcacagcattctacggcagcagacacagcggtcggaaactcacc
tggctctaccacctgtctaaaggagagctggtcaccaactgctttaaaaacaggtacact
ctgcaggcctctaccttccagatggcaatcctgctgcagtacaacacagaggacctgtac
tccgtacaacaactcactgacagcacacagatcaaaaccgacattctggttcaagtgttg
cagatcttgttgaaatccaaattgctggtcctggaggatgagaatgctaacatagacgaa
gtggagttcaaaccagaaaccctgatcaaactcttcctgggatacaagaataagaagctg
cgtgtgaacattaacgttcctatgaagactgaacagaaacaggagcaggagaccacacac
aagaacatagaggaggaccgcaagctcctcatacaggctgccatagtgaggataatgaag
atgaggaaggttctgaaacaccagcagctcctggctgaagtcctaaaccagctctcgtcc
cgcttcaaacccagagtccctgtcattaagaagtgtatagacatcctgatagagaaggag
tatctggagagagtggatggagagaaagacacgtacagctacttggcttaa
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