Salvelinus sp. IW2-2015 (Arctic char): 111979052
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Entry
111979052 CDS
T05762
Name
(RefSeq) extensin-like
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
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Gene cluster
GFIT
Motif
Pfam:
RVT_1
Motif
Other DBs
NCBI-GeneID:
111979052
NCBI-ProteinID:
XP_023865112
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Position
LG19:27209805..27221156
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AA seq
924 aa
AA seq
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MPPKKDEDHISAGQALVNDVHRDMLNRFVFGYLDDILXFSRSAQEHVLHVRQVLQHLLEN
QLFVKAGKCELHRSTISFLGYIIAAANVQMDPRKPQIQNTPNAARNRSRYTQPAPDPDTT
NQPQIQIRTHQPKIQIPPNQPQYHPTKLPIQLLPHTAPDTEYHPIKARDIRSRYHQTKPE
SRYSTARYQSSQTSPDKYHRNSADPDTTPTARSQIPPNQQEIQIPPNQPQDPENPRPQRK
AHRPDTPKQAQISAYTKPAPPIQDTTQPAQIQIPPNRSPDPDTPPNQPRSRYHPTAPDPD
TPTAQIQIPPNQPQIQITPQPAQIQIPPPTPRSRYHPISPDPDTTQPAQIQIPPNQPRSR
YHQPVPRSRYTQPAQIQILPNQPDPDTTQPAQIQIPPNQPQIQIPPKPAPDPDHNLTNQP
QKPTQQPPHPDTTQPAQIPPNQPRSRYTQPAPDDHPTSPDPEYPNQPQIQIPPKPAHPES
QIPAPNQFIPQPVRQIQILTQPANSAEYLKTAPEHQLHPQAHPDTTTSIQLSPHPEPEYP
PKSDAPDPDNDRDTPNQPPGSNLIAPHPSPRSRYTQPAPDPDPTQPAPDNHPNSPDPVLP
STKPQIQIHPTSPQDPDTQPNQPRSRYHPTSPRSRYHPTSPPRSYHPISPRSRYHPPAQI
KNPHQPAQIQIPPNQPQIQILTQHSPESDHLQPNQPRSQIPPNSPDPDTTQPSPRSRYHQ
PAARSRYHPTAQIQIPPNRPRSPPNQPRSRYHPTSQFRYHPTSPRSRYTHQQSSPRYHHQ
PRSRYTQPAPDPDTTQPAPDPDTTQPAPDPDTTQPAQIQNHPAKPAQIQIPDPPARSRYP
PNQPQIQIPPNQPQIQIPPNQPQVQIPPNQPQIQIPPNQLQIQLPVHPLTRPLGFFPCDQ
AFMLCPFSITLLCFPAIPPPSSWL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaaaaaagacgaggatcacatctctgctgggcaggccctggttaacgacgtt
caccgtgacatgttgaaccgattcgtgttcggctacctcgacgacatcctcrtcttttcc
cgctctgctcaagaacacgttctccatgtccgacaagtcctccagcatctcctggagaac
cagctttttgtgaaagcaggaaaatgtgaattacatcgctccaccatctccttccttgga
tacatcatcgctgctgctaatgtgcagatggatcccagaaagccccagatccagaatacc
cccaacgcagccaggaacagatccagatacacccaaccagccccagatccagataccacc
aaccagccccagatccagatacgcacccaccagcccaagatccagataccacccaaccag
ccccaataccacccaactaagctcccgatccagctactaccccacacagccccagataca
gaataccaccctatcaaggctcgcgatataagatccagataccaccaaaccaagccagag
tccagatactccacagccagataccagagcagccaaaccagcccagataaataccaccgc
aatagcgcagatccagataccaccccaacagccagatcccagataccacccaaccagcag
gagatccagataccacccaaccagccccaagatccagaaaacccacgccctcaacgcaaa
gcccacagaccagatacacccaaacaagcccagatctcagcatacaccaaaccagcccca
ccgatccaggataccacccaaccagcccagatccagataccacccaaccgcagcccagat
ccagatactcccccgaaccagcccagatccagataccacccaacagccccagatccagat
acacccacagcccagatccagataccacccaaccagccccagatccagataacaccccaa
ccagcccagatccagataccacccccaacacccagatccagataccacccaatcagcccc
gatccagataccacccaaccagcccagatccagataccacccaaccagcccagatccaga
taccaccaaccagtccccagatccagatacacccaaccagcccagatccagatactaccc
aaccagcccgatccagataccacccaaccagcccagatccagataccacccaaccagccc
cagatccagataccacccaaaccagccccagatccagatcacaacctcacaaaccagccc
cagaagcccacccaacagcccccgcatccagataccacccaaccagcccagataccaccc
aaccagcccagatccagatacacccaaccagctccagatgaccacccaaccagcccagat
ccagaataccccaaccagccccagatccagataccacccaaaccagcccacccagaatcc
cagataccagccccaaaccagttcataccacaaccagtgcgccagatccagatactcacc
caaccagctaattcagcagaatacctcaaaaccgcaccagagcatcagctacacccccag
gcccatccagataccacaaccagcatccagctaagtccccacccagaaccagaataccct
ccgaagtcagacgccccagatccagataacgaccgagatacacccaaccagcccccagga
tccaacctgatagcaccgcaccccagccccagatccagatacacccaaccagcccccgat
ccagatcccacccaaccagccccagataaccaccccaacagcccagatccagtactaccc
tcaaccaagccccagatccagatacacccaaccagcccccaagatccagatacccaacca
aaccagcccagatccagataccacccaaccagccccagatccagataccacccaaccagc
ccccccagatcataccacccaatcagccccagatccagataccacccaccagcccagatc
aagaatccacaccaaccagcccagatccagataccacccaaccagccccagatccagata
ctcacccaacacagcccagaatcagaccacctccaacccaaccagcccagatcccagata
ccccccaacagcccagatccagataccacccaaccaagccccagatccagataccaccaa
ccagccgccagatccagataccacccaacagcccagatccagataccacccaaccgcccc
agatcaccacccaaccagcccagatccagataccacccaaccagccagttcagataccac
ccaaccagccccagatccagatacacccaccagcaatccagccctagataccaccaccag
cccagatccagatacacccaaccagccccagatccagataccacccaaccagcccccgat
ccagataccacccaaccagccccagatccagataccacccaaccagcccagatccagaac
caccccgccaaaccagcccagatccagatacccgacccaccagcccgatccagatatcca
cccaaccagccccagatccagataccacccaaccagccccagatccagataccacccaac
cagccccaggtccagataccacccaaccagccccagatccagataccacccaaccagctc
cagatccagttacctgtccacccactgacccgcccacttggcttcttcccctgtgatcaa
gccttcatgctctgtcccttctccatcaccctgctgtgcttcccagccatccctccacct
tcctcctggctataa
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