Salvelinus sp. IW2-2015 (Arctic char): 111979405
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Entry
111979405 CDS
T05762
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03010
Ribosome
salp04120
Ubiquitin mediated proteolysis
salp04137
Mitophagy - animal
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
111979405
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111979405
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111979405
04137 Mitophagy - animal
111979405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
salp03011
]
111979405
04121 Ubiquitin system [BR:
salp04121
]
111979405
Ribosome [BR:
salp03011
]
Ribosomal proteins
Eukaryotes
Large subunit
111979405
Archaea
111979405
Ubiquitin system [BR:
salp04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
111979405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
111979405
NCBI-ProteinID:
XP_023865683
LinkDB
All DBs
Position
LG19:30863516..30866954
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTSN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaacgttgacgggtaaaaccatcacccttgaggtggaacccagt
gacaccatcgagaatgtgaaggccaagattcaagacaaagaaggtattcctcctgaccaa
cagcgactcatcttcgctggcaaacagttggaggatggccgcacattgtcagactacaac
attcagaaagagtccactcttcatctcgtccttcgtctgagagggggtattatcgagcct
tccctgagacagctggcacagaaatacaactgtgacaaaatgatctgccgcaaatgctat
gcacgtcttcacccccgtgcagtcaactgccgcaaaaagaagtgtgggcacaccagcaac
ctgcgccccaagaagaagctgaagtaa
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