Salvelinus sp. IW2-2015 (Arctic char): 111979610
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Entry
111979610 CDS
T05762
Name
(RefSeq) opsin-5-like
KO
K08385
G0-opsin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
salp04030
]
111979610
G protein-coupled receptors [BR:
salp04030
]
Rhodopsin family
Vision
Opsin
111979610
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Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7tm_4
Motif
Other DBs
NCBI-GeneID:
111979610
NCBI-ProteinID:
XP_023865973
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Position
LG19:complement(15548977..15559529)
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AA seq
470 aa
AA seq
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MADKVFGVXWQSTEWCLCLSLWSAGVCSLFGNSTLLYVSYKKKHLLKPAEMFIINLAISD
MGLTLSLYPMAITSSIYHKWLFGKTVCLIYAFCSVLFGICSLTTLTLLSMVCFVKVCYPL
YGNRFNPGHGRLLIACAWVWALVFAFSPLAHWGEYGPEPYGTACCIDWRLSNLHPVARSY
TMALFILCYIVPCCIITVSYTGILMKVRASRKAMEHHEARPAKMSNIHTVIVKLSVAVCI
GFFTAWSPYAVVSMWAAFGHMENIPPLTFAILAMFAKSSTIYNPIIYLLLRPNFRRVMYR
DLVSFHRACLKGCLCSCSQGAVGKCRSGSVVQVSLRSLRRPPGHDQSCSTNSSANQALAG
YRGCSSTCEKCSDAFECFRHYPRDCHGGTNPPSSSINTNAPQXQLSTEPQPKLQPLTQKP
TWKQRQKHKKQEACHKKSLRATMSSKRTSEIDNLQITLEMVPGHAKFAWP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaargtgtttggcgtcgrgtggcagagtactgagtggtgtctctgtctctct
ctctggtctgcaggtgtgtgctctctgtttggcaacagcacactgctctacgtctcctac
aagaagaagcacctgctcaaaccagctgagatgttcattatcaacctggccatcagcgac
atgggtctgactctgtccctctaccccatggccatcacctccagcatctaccacaagtgg
ctgtttgggaaaacggtgtgtttgatctacgcgttctgtagcgtgttgtttgggatctgc
agtctgaccactctcaccctgttgagcatggtgtgttttgtgaaagtatgttatcctctc
tacggtaaccgattcaacccggggcatggccgtctgctgatagcctgtgcgtgggtctgg
gccctggtgttcgccttctcccctctggcccactggggtgagtatggtccagagccatat
ggcacagcctgctgcatcgactggcgcctgtccaacctgcaccccgtggcccgctcctac
acaatggcgctctttatcttgtgctacatcgtgccctgctgcatcatcacagtatcctac
acgggcattctgatgaaggttcgagcctctcgtaaggccatggaacatcatgaggcccgg
ccggccaagatgagcaacatccatactgttattgtgaagctgagtgttgctgtctgtatc
ggtttcttcacagcgtggagcccttatgccgtggtgtcgatgtgggcagcgtttggacac
atggagaacatcccaccgttgacgttcgccatactcgcaatgtttgccaagtcctccacc
atatacaaccccatcatctacctgctgctcaggcccaacttccgcagggtgatgtaccgg
gacctggtgagctttcacagggcctgtctgaagggctgcctgtgctcctgctcccaaggc
gctgtggggaagtgccgctccggctctgtggtccaggttagcctccggtcgctccgcaga
ccaccaggacacgaccagtcctgttccaccaactcatctgccaaccaagccctcgccggg
tacagaggttgtagcagcacctgcgagaagtgcagcgacgccttcgagtgcttcagacac
taccccagagattgccatggtggcaccaacccccccagctcctcaatcaacactaacgca
cctcagyatcagctctcaacagagccccagcccaagctgcagccactgacacagaaacca
acatggaagcagaggcagaagcataaaaaacaggaggcctgtcacaagaagtccctgcga
gccaccatgagcagcaaaaggacctcggagatcgacaacctacagatcaccttggagatg
gtgccgggacacgctaaatttgcctggccatag
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