Salvelinus sp. IW2-2015 (Arctic char): 112071880
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Entry
112071880 CDS
T05762
Name
(RefSeq) collagen alpha-2(IV) chain-like
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
112071880
NCBI-ProteinID:
XP_023995080
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
SDWLLLGLTVPCRLPGEDGEPGYPGLPGRTGPKGEPGFPGGPGRPGFDGGKGERGDPGFG
GQPGPQGFPGPRGDAGVPGIPGEGRPGAPGKNGFQGRPGGKGQPGEVLGASTGLPGSPGF
PGGPGDKGERGASGLPGGSGFDGRSGIPGAKGERGTDGYPGALGLPGLPGDRGNGFPGPA
GPAGSKGLPGSPGYPGLKGARGDAGFPGPTGRKGQPGQPGGDGSSGLRGLPGPPGPGGRN
GIPGGPGRKGESGYPGLAGFPGMPGNPGRPGGPGGKGAPGFSGKDGLPGRFGAPGPKGDE
GYRGLPGPPALPRIVDYLEKGQRGDNGANGLPGFPGPRGDKGFPGQPGRQGLPGLPGYAD
RAKGEPGLPGLPGRPAGPGYPGPKGSPGIIGFPGMPGPRGDDGRPGFPGNPGVPGQPGAK
GERGDSSGYPGSPGAKGESGTPGYPGGQGANGAPGDNGFPGGPGFSGQKGAPGVPGRPGL
LGTPGFTGAKGLNGYPGGRGLDGTTGRPGSPGSSGEKGLPGSPGLDGLNGLAGPNGIPGT
PGYSVEGRPGTPGAAGLKGERGSSIPGPPGYNAEKGARGDCPDSMEKKVTVVLQAPQAHR
GPVRPRETEVTLGYLASPVPLGDVETLEVPVVQEGKAALGSMEREATLGTVECQEPKATL
EIQDITEGKDPKERKVLLVVRGPQV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
tctgactggctgttactagggttgacggtaccttgtcgtctacctggcgaggacggagaa
cccggctacccaggattacctggaagaacaggtcccaagggtgagccaggtttcccaggg
ggtcccggtcggcccggctttgatggagggaagggagagagaggagaccctggcttcgga
ggtcagcctggaccacaaggtttccctggccccagaggagatgctggggtcccaggtatc
ccaggcgagggccgtccaggggccccagggaaaaacgggttccaggggcggccgggggga
aaggggcagccgggggaggttctgggggcctcaacaggtctccctggatcacctgggttc
ccaggaggaccaggagacaagggagagcgaggagcatcaggacttcccggaggatcaggt
tttgatggtcggtcgggcattcccggagctaagggtgagcgcggtacggatggctacccc
ggagctctaggtcttcccggacttcctggagacagaggcaatggatttcccggtcctgct
ggaccagccggaagcaaaggattacccggatctccaggctaccccggtttaaaaggagcc
agaggtgacgctggcttcccaggcccaactgggaggaagggacaaccaggacaaccagga
ggggatggatcatcaggactcaggggccttccgggaccaccgggccccgggggaagaaac
ggcatccctgggggaccagggaggaagggcgagagtggttaccctggactggcgggtttc
cccggaatgccaggtaaccctggaagacccggtggaccaggaggtaaaggagctccgggg
ttctcaggaaaagacggcctgcccggtcgcttcggagcgccaggacctaaaggtgacgaa
ggttaccgtggtctccctggcccacccgctctgccccgcatagtagattacctggagaag
ggacagaggggcgacaatggtgccaatggactacctggtttccctggacctagaggtgac
aagggtttcccaggccagcctggtcgtcagggtctgcccgggctgcctggttatgctgac
agggctaaaggtgaaccaggacttcccggtctccccggacgcccggccgggccaggctac
ccaggccctaaaggatctcccggtatcatcggcttccctggcatgcctggaccaaggggt
gacgatggcaggcctggtttccctggtaaccctggagtgcctggtcagccaggtgctaaa
ggggagagaggtgactcgtccggctaccccggaagtcccggagctaaaggtgagtccgga
acccccggttacccaggtggccaaggtgctaatggcgcccccggcgacaacggtttccca
gggggccctgggttcagcggacagaagggagcaccgggagttcctggaagacccggactc
ttgggtacccctggtttcactggggcaaagggtctgaacggatacccaggaggaagaggt
ctggacgggacgactggccgccccggctcccctggatcatctggagaaaaaggtctgccg
ggatctcctggtcttgatggactcaacggactggctggaccgaacggtataccaggaacc
ccgggttatagtgtggagggtcgccccggcacccctggagcggccggtctgaagggagag
aggggatcctccatcccaggacccccgggatacaacgcggagaagggagcgagaggagac
tgcccggactcgatggagaagaaggttacggtggtcctccaggccccccaggcccaccgg
ggcccagtacggcccagggagacagaggtgacgctgggctacctggcttccccggtaccc
ctgggagacgtggagaccctggaggtcccggtggtccaggaagggaaggcagccctgggt
tcaatggagagagaggcgactctgggtacagtggagtgtcaggaaccaaaggctaccctg
gagatacaggatattacggagggaaaggacccaaaggaaagaaaggttcttctggtggta
agggggccccaggtataa
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