Salvelinus sp. IW2-2015 (Arctic char): 112075543
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Entry
112075543 CDS
T05762
Name
(RefSeq) protocadherin-16-like
KO
K16507
protocadherin-16/23
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
112075543
Cell adhesion molecules [BR:
salp04515
]
Cadherins
Cadherin related
112075543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Glrx-like
Motif
Other DBs
NCBI-GeneID:
112075543
NCBI-ProteinID:
XP_023998297
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MTITCEGGPRASVCSGLWRPRSLLLLYTVLELVVVHSTPVLGALELQLDEEQPAGTIVGD
ISAGLPPGITASLYFISDHEGTGVGSDLNIDETSGIITTARRLDREQRDHYSFIAVTMTG
VTVEVSVTVNDINDHAPAFLKPKALLKIPEQTAVGTRVSLEPASDADRDQLTTQGYVIKE
GNVGQAFRLETKRAANKVWEKRSSYSLVLEAFDGGSQTHRPDDLEVSVTIMHAPSSTRAD
QRSSQRVYTGKQHLQVFASDADEGDNGLVLYEINRRQSDPDRYFVMDTRSGVITLNRPLD
YELKRVHELVVQARDNASHPEVTNAFVTIHVRDYNDNQPTMTIIFLSEDGSPRISEGAQP
GQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDSIIYLICVDQVLDREERDTYELR
VMATDAGTPPLRAESSFTIQVTDVNDNPPLFDQQAYKQTIPEVVYPGSFVLQVTARDKDQ
GPNGDIRYSLLKDKKSHSDWFSIDPVTGIITTAMALDYESEPAPSVTVVATDNGRPPMSS
TARVAVVLQDVNDNEPVFPSNFYNVTIKENTAVGTCFLEVGTALSVCLSVCFLSVYLSLL
SCCSSCG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacaataacgtgtgaaggtgggcccagggccagtgtgtgttcaggcctttggaggcca
cggtctctcctcctgctctacacggtcctagagctggttgtggtccactccaccccggtc
ctgggagctctggagctccagctggatgaggagcagccggcagggaccatcgtaggggac
atcagtgctgggctaccccccggcatcaccgcctcgctgtacttcatctccgaccacgag
gggacaggtgtgggcagcgacctcaacatcgacgagacctccgggatcatcaccacggca
cgccgcctcgaccgcgagcagagggaccactacagcttcatcgccgtcaccatgaccggg
gtcacagtcgaagtgtccgtcacggtcaacgacatcaacgaccacgcgccggcgttcctc
aagccaaaggcattgctgaagatcccggagcagacggcggtgggaacacgggtttccctg
gagccggcgtcggacgcggaccgcgatcagctgaccacccaaggatatgtgattaaggaa
ggcaatgtggggcaagccttcaggctggagaccaaaagagctgctaacaaggtatgggag
aagaggtcttcgtacagcctggtcctggaggccttcgacggggggagtcagacgcaccgg
cctgatgacctggaggtctctgtcacgataatgcacgccccgtcttcaaccagagcagat
cagcgatcatctcagagagtttacacagggaagcaacatctgcaggtgtttgcgtccgac
gctgacgagggagacaacggtctggttctgtacgagatcaaccgtcgccagagcgaccct
gaccgctacttcgtcatggatacgaggtcgggggtcatcactctgaaccgtccgctggac
tacgagttgaagagagtccacgagctggtggtacaggccagagacaacgccagccaccct
gaggtgaccaatgccttcgtcaccatccacgtccgagactacaacgacaaccaaccsacc
atgaccatcatcttcctcagcgaagacggctcgccgcgtatctccgaaggcgcccagccc
ggccagtacgtggcacgcatctcggtgaccgaccccgactacggagaatacgctaacgtt
aacgtttcgctcgagggaggggatgggaagttcgccctgaccaccaaggacagtattatc
tatctgatctgtgtggaccaggtgttggaccgcgaggagagggacacgtacgagctgaga
gtgatggcaacagacgcaggcacccctcctctcagggctgagtcgtcctttactatccag
gtcactgatgtgaatgataatccaccactcttcgaccagcaggcttacaaacagaccatc
ccggaggtcgtctacccaggatcctttgtgctccaggtgacggcccgggataaggaccag
gggcccaatggggacatccgatacagcctcctcaaagacaaaaagagccactccgattgg
ttctccatcgacccagtgacggggatcatcaccacggcgatggcactggattatgagtcg
gagccagcgcccagcgtgacggtggttgccacggacaacgggcggcctcctatgtcgtcg
acggcgagggttgccgtggtgctgcaggatgtaaacgataacgagccggtgttccctagt
aacttctacaacgttacgatcaaggagaatacagcagtcgggacctgcttcttagaggta
ggaacagctctgtctgtctgtctgtctgtctgttttctctctgtctatctctcactgcta
tcttgttgttcttcctgtggataa
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