Salvelinus sp. IW2-2015 (Arctic char): 112080480
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Entry
112080480 CDS
T05762
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
112080480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
112080480
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
112080480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
112080480
NCBI-ProteinID:
XP_024002029
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MDVCPAEGLPEVEASPEPEPESQNKQSPPATEAPAVTEQPEPADQKAPPTAATPEEEGAD
EAGCEGSVGKDRGGNVLPAEDVDRDVGMGGGRNIPQIITSQDPLSISLTVSLAPVTKHSG
SLLPVEERSAEDGDVFGVDDLEMQTGLLTVEDEDRPTSAASYGSVIVHERVTTLVKLFKA
RTVRKREKLMDPDDSEEDSPQTTPAKAPPPPPPPEEDKDISAPVEEEEVEEYWDFYGYPI
KILKLPKMPPLPSWLQTIVDFRFPSSIDPYTDLVYVVWLFFVMMAWNWNVWLIPVRWAFP
YQTADNIYWWLFMDYTCDLIYITDILVFQPRLEFVRGGDIVCDKKDMRDNYMTTERFKMD
CISMFPMEIFYYFTGVNSLLRFPRLLKYMAFFEFNDRLEAVMKKAYIYRVILTTSYLLYS
LHINACLFYWGSDYEGLGSTKWVYNGKGNSYIRCYYFAVKTLITIGGLPDPTTVFEITFQ
LVNYFVGVFAFSIMIGQMRDVVGAATAGQNYYRACMDNTIKYMTSYHIPTEVQNRVKTWY
DYTWQIQGMLDEQELLIQLPDKMRMDMAVDVNYSIVSKVALFQGCDRQMIFDMLMRLKSV
VYLPGDFVCKKGEIGREMYIIKQGEVQVVGGPDLKTVFVTIRAGSVFGEISLLAGGGGNR
RTANVMAHGFANLFILDKRDLSDILVHYPESQKLLRKKAKKMLTKDKKPEEKAEAKETAE
VIPDRPETPKLFKAALVVTEQAGIKGTFAKLKEGYKPAETGSSGLPIPPPSLMVHRRSPI
PPTDARVEDDEDAVSETTDSMMLIRMTRRHXGEELLSVEQKQPGDEEEEMEKK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtgtccagccgaggggttgcccgaggttgaggcctcccctgaaccagaacca
gagtcgcaaaataaacagtctcccccagcgacagaggccccggcagtgaccgaacagcca
gaaccagccgaccagaaggctccacctactgccgcaactccggaagaggaaggtgccgac
gaagcagggtgtgaagggagcgttggtaaggacagaggagggaatgtgctgccagcggag
gatgtggacagagacgtagggatgggagggggtcgcaacatcccccagatcatcacctcc
caggaccccctgtccatctctctgaccgtgtctctcgcccccgtgaccaagcacagtggc
tcgctcctcccggtggaagagagaagtgctgaagatggggatgtttttggtgttgatgac
ttggagatgcagaccggcctcctgactgtggaagatgaggatcgtccaacatcagcggcc
agctatggcagtgtgattgtccatgagagagtgactacactggtcaagctgtttaaggcg
aggacggtccgcaagagggaaaaactgatggaccctgacgactctgaggaagacagccct
caaaccaccccagccaaggcgccccctccccctcctcccccagaagaggacaaggacatc
tcagccccggtggaggaggaagaggtggaggagtactgggacttctatggatacccaatc
aaaatactcaaacttcccaaaatgcccccacttcctagttggcttcaaaccatagtggac
tttcgtttcccttccagcatcgacccttatactgacctggtctacgtggtgtggctgttc
tttgtgatgatggcgtggaactggaacgtgtggctgatcccggtgcgctgggccttcccc
taccagactgcagacaacatctactggtggctgtttatggactacacctgtgaccttatt
tacatcaccgacatcctggtctttcagccccgcctggagtttgtacgcggaggagatatt
gtgtgtgacaaaaaggacatgagagacaactacatgacaacagaacgattcaagatggat
tgtatcagtatgttccccatggagatattttactactttactggagttaactcgctcctg
agattcccccgcctactgaagtacatggctttctttgagttcaacgaccgtttggaagca
gtaatgaagaaagcctacatctacagagtgatcctgaccacttcctacctgttgtattct
ctccacatcaacgcctgtctgttctattggggttctgactatgaggggctcgggtccact
aagtgggtctacaacggcaaagggaacagttatatccggtgttactactttgctgtaaag
accctgatcaccatcggtggtctcccggacccaaccaccgtgtttgagatcacattccag
ctagtcaactattttgttggcgtctttgctttctccatcatgattggtcagatgagagat
gtggtgggggctgccacygcgggacagaactactaccgggcctgtatggacaacaccatc
aagtacatgacctcctaccacatccccacagaggtccagaaccgagtcaagacctggtac
gactacacctggcaaatacagggcatgctggatgagcaggagctgttgatccagctgcca
gataagatgaggatggacatggctgtggatgttaactactccattgtgagtaaagtggcc
ctgttccagggctgtgacagacagatgatctttgacatgttgatgaggctcaagtctgtg
gtctacctccctggggactttgtctgtaaaaagggtgagatcggcagggagatgtatatc
atcaagcagggggaggttcaggtggtgggaggacctgatttgaagactgtgtttgtgaca
atcagggccggctctgtgtttggagaaatcagcttgctggcagggggcggggggaacaga
cgcacggccaatgtgatggctcacggattcgctaacctcttcatcctggataagagggac
ctctcagacatcctggtgcactaccccgagtcccagaaactcctccgcaagaaggccaag
aaaatgctgacgaaggataagaagccagaggaaaaggcagaggcgaaggagactgccgag
gtgatcccagacaggccagagacccccaagctgttcaaagcagccctggtggttacagag
caggcaggcattaagggcacktttgccaagctgaaagagggctacaaacctgccgagact
gggtcctctggactccccatacctcctccctccctgatggtacaccgtcgctcccccatc
ccccctacagatgcccgggtcgaggatgacgaagatgcggtttccgagacgaccgacagc
atgatgctcatccgcatgacacgscgtcackaaggcgaggagctcctgtccgtcgagcag
aagcagcctggagatgaagaggaggagatggagaagaagtag
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