Candidatus Syntrophocurvum alkaliphilum: SYNTR_1321
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Entry
SYNTR_1321 CDS
T06326
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
salq
Candidatus Syntrophocurvum alkaliphilum
Pathway
salq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SYNTR_1321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salq03400
]
SYNTR_1321
Enzymes [BR:
salq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SYNTR_1321
DNA repair and recombination proteins [BR:
salq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SYNTR_1321
RecFOR pathway proteins
SYNTR_1321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
nSTAND3
NB-ARC
AAA_16
AAA_18
AAA_14
T2SSE
NTPase_1
Rad17
AAA_PrkA
IstB_IS21
AAA_3
RNA_helicase
NACHT
TsaE
AAA_17
Sigma54_activ_2
AAA_25
AAA_28
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QGT99914
UniProt:
A0A6I6DJK5
LinkDB
All DBs
Position
complement(1337278..1338306)
Genome browser
AA seq
342 aa
AA seq
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MSEERLVSSLALNEEENTDTSLRPLKLNDYIGQEKIKENINIFISAAKGREESLDHVLLS
GPPGLGKTTLAVIIANEMGKPIRKTSGPAIERPGDLAAILTNLEPGEILFIDEIHRLHRS
IEEIVYPAMEDFALDIVIGKGPAARTLRIDLPPFTLIGATTRPGLLSSPLRDRFGISSRL
DYYNEKELMGIVKRAANILSIEIELEGASEIAKRSRGTPRIANRLLKRVRDYAMVKASGL
INKDVTVKALELFEIDKYGLDNVDRMILDSIIVKFGGGPVGLDTLAASVSEESDTITDVY
EPFLLKVGLLQKTPRGRIATELAYKHLGYKAGSKYANQLFDE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgaagagcgtttagtttcatcattagcattaaatgaagaagaaaatacagataca
tcacttagacctttaaagttaaacgattacataggacaggaaaagattaaggagaatata
aatatatttatctcagcagcaaaaggacgtgaagagtctctcgaccatgtcctgttaagt
ggacctccaggattaggtaaaactactcttgctgttattatagctaatgaaatgggtaaa
cccattagaaaaacttctggtccagctatagaaaggccaggagatttagcggctatatta
accaatcttgagcctggagaaatactatttatagatgaaatacatagactacatagaagt
attgaagaaattgtatatcctgcaatggaggactttgctttagatatagttattggcaag
gggcctgctgctagaactctaaggattgatctcccgccttttactttaataggtgctaca
actagaccaggtttattaagctctccactaagagatagatttggcattagttctcgccta
gattattacaatgaaaaagaattaatgggcattgttaaaagagctgctaatatattaagt
attgaaattgaattagaaggtgcgtcagaaatagcaaagcgctcacgggggactcctaga
atagctaatcgtttacttaaaagagttagggattatgcaatggtaaaagctagtggatta
attaataaagatgttactgtaaaggccttagaattatttgaaatagataaatatggttta
gataatgtggatagaatgatattagactctataattgtcaaatttggtggtggaccagtg
gggttagacacattagcagcttctgtttccgaagaatcagatacaataactgatgtttat
gaaccatttcttctaaaagtaggattgttgcaaaaaacaccgcgaggaaggattgcaact
gaattagcttataaacatttagggtataaagctggtagtaaatatgcaaaccaattattt
gatgaataa
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