Candidatus Syntrophocurvum alkaliphilum: SYNTR_2012
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Entry
SYNTR_2012 CDS
T06326
Name
(GenBank) DNA recombination and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
salq
Candidatus Syntrophocurvum alkaliphilum
Pathway
salq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SYNTR_2012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salq03400
]
SYNTR_2012
DNA repair and recombination proteins [BR:
salq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SYNTR_2012
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
SbcC_Walker_B
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QGU00606
UniProt:
A0A6I6DEV2
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All DBs
Position
complement(2072097..2073197)
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AA seq
366 aa
AA seq
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MFLKNIQIKNFRNIKKMEYNAESNLNIFMGDNGQGKTNILEAIFVSSTGKSFRTPTDTNL
INYEESWYSIKTKYVNNERKINSFIKLDQSKNKILQINNKKTSINNPESLKLVLFIPDDL
DLVKGSPLKRRKFIDFTLKQISQDYSFNFDNYGKLLRKRNLLLKNDQTNTKSFNIINDLF
VETAVKLILSRINFTSLLDQIIKPLYQEITNGKNTIKIRYALSFNIEDEKINQNILEKSF
IENQRSIKDKEIKRKKSMIGPHLDDIHLYQDNKLARHFASQGQQRNIAVCLKLAEVYAFK
KIKDYYPVFLLDEVLAELDQEKRLLLLNHLSKAEFQSFLTSVNSNNLRNVEAKLSVIKDG
QLIGKE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
ttgtttttaaagaatatccagattaaaaattttagaaatattaaaaaaatggaatataat
gcagaaagcaacttaaatatatttatgggtgataatggacaaggaaaaacaaatattttg
gaagctatttttgtatcatcaactggaaaatcatttagaacacctaccgatactaactta
attaactatgaagaaagctggtattcaataaaaacaaaatatgttaacaatgaacgaaaa
ataaattcatttattaaactagatcaatcaaaaaataaaatattacaaataaataataaa
aaaacatctataaataatcccgaaagccttaaacttgttttatttattccagatgacctt
gacttagtaaagggtagccctttaaaaagacgaaaatttattgattttaccttaaaacaa
atatctcaagattattcttttaattttgataattatggtaaacttctaagaaaaaggaat
ttattgttaaaaaatgatcaaactaatactaaatcctttaatattattaatgatttattt
gtagaaacggctgttaaactaattttatcccggataaattttactagtttgttagatcaa
attataaagcctttataccaagaaatcacaaatggtaaaaataccataaaaataagatat
gcattatcttttaatatagaagatgaaaaaataaaccaaaatatcctagaaaagtcattt
attgaaaatcaaagaagtataaaagataaagaaattaaaagaaaaaaaagcatgataggg
ccacatcttgatgatattcacttatatcaagataataaattagcgagacattttgcatca
caaggacagcaacgtaatattgctgtctgtcttaaattagccgaagtttatgcatttaaa
aaaataaaagattattatcccgtatttttactagatgaagttttagctgaattagatcaa
gaaaaaagattgttattattaaaccatttatcaaaagcagaatttcaaagttttcttaca
tcagtaaattctaataatttaagaaatgtagaagctaaattatctgttataaaagatggg
cagttaataggaaaggagtaa
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