Streptomyces noursei NK660: DC74_3951
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Entry
DC74_3951 CDS
T03082
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
salu
Streptomyces noursei NK660
Brite
KEGG Orthology (KO) [BR:
salu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
salu03016
]
DC74_3951
Enzymes [BR:
salu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
DC74_3951
Transfer RNA biogenesis [BR:
salu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
DC74_3951
Prokaryotic type
tRNA splicing ligases
DC74_3951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AIA04442
LinkDB
All DBs
Position
complement(4482599..4483792)
Genome browser
AA seq
397 aa
AA seq
DB search
MSYTEVPGAQVPIRMWADPATVEGVAMQQLRNVATLPWIEGLAVMPDVHFGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTSLTADDLPGDLSRLRSRIEQAIPVGRGMHDDPVDPR
RVHGFPTAGWDDFWGRFDGVAEAVKFRHERAAKQMGSLGSGNHFIEFCLDETGAVWLMLH
SGSRNIGKELAEHHIEQARKLPHNQGLVDRDLAVFVADTPQMAAYRNDLFWAQEYARHNR
DVMMALFQDVVRAEFRKARPTFEPVISCHHNYVAEETYEGVELLVTRKGAIRAGSGEYGI
IPGSMGTGSYIVRGLGNPASFNSASHGAGRKMSRNAAKKRFSTRDLEEQTRGVECRKDSG
VVDEIPGAYKPIEKVMEQQRDLVEVVAKLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaccgaagtgcccggcgcccaggtgccgatccggatgtgggccgatccggcc
acggtcgagggtgtcgcgatgcagcagctgcgcaacgtcgccacccttccgtggatcgag
gggttggccgtgatgccggacgtgcacttcggcaagggggccaccgtcggatcggtcatc
gcgatgcgcggcgcggtctgtccggccgccgtcggcgtggacatcggctgcgggatgagc
gcggtcaagacctcgctcaccgccgacgacctgcccggtgacctgtcccggctgcgctcc
cgcatcgagcaggcgatcccggtgggccggggcatgcacgacgacccggtcgatccgcgg
cgcgtccacgggttcccgaccgccggctgggacgacttctggggtcgcttcgacggcgtg
gccgaggcggtcaagttccggcacgagcgggcggccaagcagatgggttcgctggggtcc
ggcaaccacttcatcgagttctgcctggacgagaccggcgcggtctggctgatgctgcac
tccggttcccgcaacatcggcaaggaactggccgagcaccacatcgagcaggcccggaag
ctgccgcacaaccaggggctggtcgaccgcgacctcgccgtcttcgtcgcggacaccccg
cagatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgcccggcacaaccgc
gacgtgatgatggccctgttccaggacgtcgtccgcgcggagttccgcaaggcccggccg
accttcgagccggtgatctcctgccaccacaactacgtggcggaggagacctacgagggc
gtggagctgttggtgacccgcaagggcgccatccgggccggcagcggtgagtacgggatc
atcccgggctcgatgggcaccggctcgtacatcgtccgcgggctgggcaacccggcgtcc
ttcaactccgcctcgcacggcgccggccgcaagatgagccggaacgcggcgaagaagcgc
ttctccacgcgcgacctggaggagcagacgcggggcgtggagtgccgcaaggactccggg
gtcgtcgacgagatccccggcgcctacaagccgatcgagaaggtcatggagcagcagcgg
gacctcgtggaggtcgtcgccaagctcaagcaggtggtgtgcgtgaaggggtga
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