Snodgrassella alvi: SALWKB2_2172
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Entry
SALWKB2_2172 CDS
T03063
Name
(GenBank) 3'-to-5' oligoribonuclease (orn)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
salv
Snodgrassella alvi
Brite
KEGG Orthology (KO) [BR:
salv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salv03019
]
SALWKB2_2172
03009 Ribosome biogenesis [BR:
salv03009
]
SALWKB2_2172
Messenger RNA biogenesis [BR:
salv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SALWKB2_2172
Ribosome biogenesis [BR:
salv03009
]
Eukaryotic type
Pre-60S particles
RNases
SALWKB2_2172
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AHN29554
UniProt:
X2H820
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All DBs
Position
2385063..2385611
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AA seq
182 aa
AA seq
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MQNAKNLAWLDMEMTGLNPDTDRIIEVAMIITDSDLNILAQSEVLVIHQPDSIIDHMDKW
NTTTHTRTGLVDKVKASTLTEAEAEEKLLAFISEWIPEKASPMCGNSIHQDRRFMVRYMP
RLEAYFHYRNLDVSTLKELARRWNPTIVKGISKKGAHQALDDIKESIEEMAYYREHFLTI
PS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacgctaaaaatcttgcgtggctggatatggaaatgaccggattaaatccggat
acagaccgtattatagaggttgccatgatcattaccgatagtgacctgaatatactcgca
cagtctgaagtactggtaattcatcagccagacagcattatcgatcatatggataaatgg
aataccactacgcatacccgtactggtctggtagataaagtaaaagcttcaacgctaaca
gaagctgaggctgaagaaaaattgctggcttttatcagtgagtggataccggaaaaagcc
tcaccaatgtgtggcaattccattcatcaggatcgccgctttatggtgcgctacatgccg
cgactggaagcttacttccattaccgcaatctggatgtttctactcttaaagaattagcc
agacgctggaatcctaccattgtcaaaggtataagtaaaaaaggtgcacatcaggctctg
gatgacattaaggaaagcattgaggaaatggcttattatcgcgaacacttcttaacaata
cctagctga
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