Salinivibrio sp. YCSC6: E8E00_02585
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Entry
E8E00_02585 CDS
T05946
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
saly
Salinivibrio sp. YCSC6
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saly03400
]
E8E00_02585 (sbcD)
DNA repair and recombination proteins [BR:
saly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E8E00_02585 (sbcD)
Archaeal homologous recombinant proteins
E8E00_02585 (sbcD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
QCF35148
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All DBs
Position
I:592749..594029
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AA seq
426 aa
AA seq
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MTSSFFNQRITPAVLKIIHTSDWHLGHQLHGYDRQQEHQAFLDWLQQQLIDEEADALLVA
GDIFDSANPPASAWRMLYRFLADVAKALPQLNVIITGGNHDSPSKLDAPHELLKAFDLHL
IGAISRHSDGSLDTERMMVPVTDKEGQTAAWVMAVPFLRSSDLRTEGLGEDDDRLIEGVR
QIYQQTEQAARAKCTGSQALIAMGHVYMASGQLSEMSERRILGGNQHALPADIFAKDVAY
VALGHLHLAQRVAKQERIRYCGSPIPLSLSERHYRHQVLAVTLEGEQLADIRSLEVPRKV
DLLRVPDKPAPLDEVIEALQALTLSSLSLDMQPLLEVPVLLDAPQPMLREKILAALEGQP
IRLAKITPHYRDRTHERQFREQRLSDVEPFQVFRHGWQQKYQGEPDPAIAATFSHLLEQL
EQDEDQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgtcttttttcaaccaacggataaccccagcagtgttaaaaatcattcatacc
tcagattggcaccttggccaccaattgcatggctatgatcgtcagcaagagcaccaagcg
tttcttgattggctacagcagcaattgatagatgaagaggcggatgccttgttggttgcc
ggagacatcttcgatagtgccaatccgcctgccagcgcttggcgtatgctataccgcttc
ttagcggatgtggctaaggcattgccccaactgaatgtgattattaccggtgggaaccat
gactcacctagcaaactcgatgcgccacacgagctactcaaagcctttgatttacactta
attggtgctatctcacggcacagcgatggtagtttagataccgagcgtatgatggtaccg
gtgacggacaaagaggggcaaaccgccgcttgggtgatggcagtgccttttttacgtagc
agtgatttacgcacggaaggattgggggaagacgatgatcgtctcatcgaaggggtgcga
cagatttatcagcaaactgaacaagcggcgcgcgccaaatgcacggggagccaagcgctg
attgcgatggggcatgtttatatggcgagtgggcagctatcagaaatgtctgagcgacgc
attctcgggggcaaccagcatgcgctgccggctgatatttttgccaaggatgttgcctat
gtggcactaggacatttgcaccttgcccagcgggtcgcgaagcaagagcgaattcgctat
tgtggttcgccgatcccactgtctctttcagagcgacactatcgtcatcaagtgctcgct
gtcacgttagagggggagcagcttgccgatattcgctctcttgaagtaccgcgaaaggtc
gacttactgcgtgtgccagacaagcctgctccgcttgatgaagtgatagaagcgctgcag
gcgctgaccctttcctcactatcgctggatatgcagccgttattggaagtgcctgttcta
ttggatgccccgcaaccgatgttgcgtgagaagatcctcgcggcgctagaggggcagcct
atccgtttggcgaagataacgccgcactatcgtgaccgcacccacgagcgccaatttcgt
gagcagcgcttgtctgatgtcgagccgtttcaagttttccgtcacggctggcagcaaaaa
tatcaaggtgagccggatccggctatcgcagcgactttttcacatttgcttgaacaactg
gaacaggatgaggaccaataa
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