Salinivibrio sp. YCSC6: E8E00_04020
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Entry
E8E00_04020 CDS
T05946
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
saly
Salinivibrio sp. YCSC6
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saly03016
]
E8E00_04020 (cmoB)
Transfer RNA biogenesis [BR:
saly03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
E8E00_04020 (cmoB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_12
CMAS
Motif
Other DBs
NCBI-ProteinID:
QCF35408
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Position
I:complement(906499..907470)
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AA seq
323 aa
AA seq
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MFDFSDFYQLIAKNRLSHWLEVLPAQLAEWQNQPHGDMPKWIKVLNKIPTTTPETVELKD
AVRIGDDQSLPSGERKKLENLLRSFHPWRKGPYQVHGIDIDTEWRSDWKWDRVLPHISPL
KGRYILDVGCGNGYHMWRMLGEGAALTVGIDPSELFLMQFDAIRRLMGNDQRAHLLPLGI
EKLPALRAFDTVFSMGVLYHRRSPLDHLIQLKDQLRKDGELVLETLVIDGDENAVLVPTD
RYAQMRNVYFFPSARALKVWLEKVGFVDIRIVDECVTTTDEQRSTEWMTHNSLPDYLDPA
NPHLTVEGYPAPKRAILVARNPD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatttttctgatttctatcagcttattgccaaaaaccgtctaagccactggttg
gaggttcttccggcccaattagcggagtggcaaaaccagccgcatggcgatatgccgaag
tggattaaggtgcttaataagatcccaaccaccacgcccgagacggttgagctgaaagac
gcggtacgtattggcgatgaccaaagtctgccgtccggtgaacgcaaaaagctcgaaaac
ttattacgtagcttccatccgtggcgcaaagggccgtatcaggtgcatggcattgatatt
gataccgaatggcgctccgactggaaatgggatcgtgtgcttcctcatatttcgccactc
aaaggccgttacatcttggatgttggttgtggtaatggctatcacatgtggcgtatgctg
ggagaaggcgcagcactgaccgtcggtattgacccatcagaacttttcttgatgcagttc
gatgccatacgtcgcttgatgggcaacgaccaacgcgcccaccttctgcctttgggaatc
gaaaagctaccagccctgcgtgcattcgacaccgtgtttagtatgggtgtgttatatcac
cgccgctccccgctcgatcatctgatccaacttaaagatcaattgcgtaaagatggcgag
ctggtgttggaaaccttagtgatcgatggcgatgaaaacgcagtgttggttccgactgat
cgttatgcacaaatgcgtaatgtgtatttcttcccctctgcgcgcgcactgaaagtctgg
ctcgaaaaggtcggcttcgtagacattcggattgtcgatgagtgtgtgactaccactgac
gagcaacgtagcaccgagtggatgacccataattcgctgcccgattaccttgaccctgcc
aatccgcatcttacggtggaaggctatcccgcccctaaacgtgccattttggtcgcacgt
aaccctgattaa
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