Salinivibrio sp. YCSC6: E8E00_04180
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Entry
E8E00_04180 CDS
T05946
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
saly
Salinivibrio sp. YCSC6
Pathway
saly00521
Streptomycin biosynthesis
saly00523
Polyketide sugar unit biosynthesis
saly00541
O-Antigen nucleotide sugar biosynthesis
saly01100
Metabolic pathways
saly01110
Biosynthesis of secondary metabolites
saly01250
Biosynthesis of nucleotide sugars
Module
saly_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
E8E00_04180 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E8E00_04180 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E8E00_04180 (rfbD)
Enzymes [BR:
saly01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
E8E00_04180 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
DapB_N
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QCF35436
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Position
I:936044..936916
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AA seq
290 aa
AA seq
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MKILITGCNGQVGHCLVDQLTDKADVLALNKNKLDITDQAAVASVVSQFMPDYIINAAAY
TAVDKAEEDMDLSFAINRDGAKYLADAANSCDAVMLHISTDYVFDGEGHEPYKENDIVAP
QSVYGQSKLAGELAVAEACHQHLILRTAWVFGEHGNNFVKTMLRLGEGRDALRIVGDQFG
GPTYAGDIASALIKMVEYIEQKKSPEWGIYHFSGTPYVSWYEFAENIFQKAQSYSVLEKT
PSLSSISTSEYPTPAKRPANSCLDCGKIEKQFGIEPSDWQASLDNIKSYK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatactcattacaggatgcaatggccaagtcggtcactgtttagtagaccagcta
acggacaaagctgacgtactggcgctaaataaaaacaaacttgatattacagaccaagcc
gctgtcgcgtcggttgtatcacagtttatgcccgattatataattaatgctgccgcatac
accgcagtcgataaagcagaagaagacatggacttgtcctttgctattaatcgcgatggc
gcaaaatacctcgccgacgcggcgaacagttgcgacgcggttatgttacatatttcaacc
gactatgtttttgatggggagggccatgagccatataaagaaaatgatatcgttgctcct
caaagcgtctatggtcaaagtaaattagcaggagagttggcagttgcagaagcatgtcac
cagcacttgatattacgtaccgcttgggtatttggtgagcacggtaataactttgtgaaa
actatgctgagactaggtgagggtcgtgatgcgctgaggattgtcggcgatcaatttggt
gggccgacttacgctggtgacatcgcttctgcgcttatcaagatggtcgaatatatcgaa
caaaagaaatcgccagagtggggtatttatcatttctctggcacgccttatgtaagctgg
tatgagtttgctgaaaatatctttcagaaagctcaaagctactcggtattagaaaaaaca
ccgagtttgtcttcaatatctacgtctgagtacccaacccccgctaagcgccctgccaat
tcttgtctagactgcggaaaaatcgagaagcagtttggtattgaaccgagtgattggcag
gcatctttagacaatattaaatcttataagtag
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