Salinivibrio sp. YCSC6: E8E00_10675
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Entry
E8E00_10675 CDS
T05946
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
saly
Salinivibrio sp. YCSC6
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saly03021
]
E8E00_10675 (rpoS)
Transcription machinery [BR:
saly03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E8E00_10675 (rpoS)
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QCF36583
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Position
I:complement(2311672..2312646)
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AA seq
324 aa
AA seq
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MSQTNTAKKLDGLDQDVDFETLDAQVEEVAEEVEEAVQQHAATSKALDATQLYLSEIGFS
PLLTAEEEVLYARRALRGDEVARKRMIESNLRLVVKISRRYSNRGLALLDLVEEGNLGLI
RAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRTARELAQK
LDHEPTAEDIAAQLDKPVEDVNRMLRLNERIGSVDNPIGGDSEKALLDIIADEKQDGPEH
TTQDDDMKKSIVQWLQELNPKQREVLARRFGLLGHEASTLEDVGREIGLTRERVRQIQVE
GLRRLRDMLTQQGLSIESLFNVEQ
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaactaacaccgcgaaaaaactggacggcttggatcaagacgtggatttcgag
accttggatgcgcaagttgaagaggttgccgaagaggttgaagaggctgtacaacagcac
gctgcgacatccaaagccctagatgccacacaactctacttgagtgaaattggtttttca
cccctgctgaccgccgaggaagaagtgttgtatgcgcgtcgtgccctacgtggtgacgaa
gtggcacgtaaacgcatgatcgagagtaacctccgtttggtggtgaaaatttctcgacgc
tactctaaccgaggtcttgcgctattggatctggtcgaagaaggcaatttaggtctgatt
cgcgccgttgaaaagttcgatccagagcgaggcttccgattctctacctacgccacatgg
tggattcgccaaaccattgagcgtgccatcatgaaccagacgcgtaccattcgcttgccg
attcacgtggtgaaagagctgaatgtctacctgcgtacggcgcgtgaactggcacaaaaa
cttgaccatgaaccgactgccgaagacattgccgcccaactcgataaaccggttgaagac
gtcaatcgcatgctgcgtttgaacgaacgcattggctcggtagataacccaattggtggg
gattcagaaaaagcgctgctggatatcatcgccgatgaaaaacaagatggtccagagcac
accacccaagacgacgatatgaaaaagtcgatcgtgcaatggctacaagagctgaacccc
aaacaacgtgaagtgttggcgcgtcgctttggccttcttggccacgaagcctccacgctt
gaagacgtggggcgtgaaattggtctaacccgtgagcgcgtgcgtcaaattcaagttgaa
ggattgcgtcgcctacgcgatatgttgacccagcaaggactgagtattgagtctttgttt
aatgtcgagcaataa
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