Salinivibrio sp. YCSC6: E8E00_14225
Help
Entry
E8E00_14225 CDS
T05946
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
saly
Salinivibrio sp. YCSC6
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saly03400
]
E8E00_14225 (phrB)
Enzymes [BR:
saly01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
E8E00_14225 (phrB)
DNA repair and recombination proteins [BR:
saly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
E8E00_14225 (phrB)
Prokaryotic type
E8E00_14225 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QCF37384
LinkDB
All DBs
Position
II:complement(81478..82917)
Genome browser
AA seq
479 aa
AA seq
DB search
MHLVWFRRDLRCLDNRALHAACEANEPVVGLFVETPDQWAAHHMAPIQAGLIEARLKALR
DELGALNIPLLVTRAADYKKASETVATLANSLNINAVFVNREYELNEQNRDRQAQQQVEA
QGIDWYAYHDRNLFAPGTIRSGKGDAYKVFTPFKKACLRALEGMDQSPLKAPVPRADDKR
LAAIFASLEPIEFDYPTKSVSAWPTTEKAILDKLRTYCREQAADYKTHRDFPAIEGTSQL
SPYLAIGALSPRQCLARLQSEHPNWREPDSGAATWLSELIWRDFYQEVSAQNPSISKKHC
FLEWGESVVWDNDNAHFEAWKAGKTGFPIVDAAMQQLNTTGWMHNRLRMIVASFLTKDLL
IDWRWGEDYFMSKLIDGDFASNNGGWQWSASVGTDAQPYFRIFNPTTQGERFDSDGRFIR
RWLPALKEVPGKQIHQPWSWAEKYAQSLDYPKPIVDHAKQRKQALAIFEAAKNQPKESA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcatttagtttggtttcgacgcgatctgcgctgcctcgacaatcgtgcactgcatgca
gcgtgcgaagcaaacgagcctgttgtgggcctttttgtggaaacaccggaccaatgggct
gcccaccatatggccccgattcaggcgggattgattgaagcaaggcttaaggcgctgcgt
gacgaactcggagcacttaacattccgctgctggtgacacgagccgctgactataagaag
gcgtctgaaacggtcgcaactcttgcgaattcgctgaatatcaacgccgtgtttgtgaat
cgtgaatacgagctgaatgagcaaaatcgcgatcgccaagcacagcaacaagtggaggcg
cagggcattgattggtacgcctaccatgaccgtaatctgtttgcgcccggcacgattcgt
tctggtaaaggcgacgcgtataaagtctttaccccatttaaaaaagcctgtctacgtgca
ttagaaggcatggatcagtcaccgcttaaggcaccagtcccacgtgctgacgataagcgg
ttagccgctatttttgcttctcttgagccgattgaatttgactatccaaccaagtccgtc
tccgcatggccgaccacggaaaaagccatcttagataagttacgcacttattgccgtgaa
caagcggctgattacaagacgcaccgggatttccctgccattgagggcaccagtcagctg
tcaccgtatcttgccattggcgcattgtcccctcgccaatgcctagcgcgattgcaatct
gagcatccgaactggcgcgagcctgattcaggcgcagcaacttggttgtcagagctaatc
tggcgcgatttctatcaagaagtgagtgcccaaaaccccagtattagcaaaaagcattgc
tttttagagtggggagagtctgtggtgtgggataacgacaacgctcactttgaggcgtgg
aaagcgggtaaaaccggctttccgattgtggatgctgcgatgcagcaattgaacactacc
ggatggatgcataaccgcctacggatgatagtggcaagctttttaaccaaggacttgctc
atcgattggcgttggggggaggactactttatgtccaagctgattgacggcgactttgcg
tccaataacggtggttggcaatggtcagcgtcagttggcaccgatgcacagccttacttt
cgaatttttaatccgacaacccaaggggagcgcttcgacagtgatggccgcttcatacgt
cgttggttaccggcactaaaagaggtgcctggtaagcaaatccatcaaccttggtcgtgg
gcagaaaagtatgcgcagtcattagattaccccaaaccgattgttgatcatgccaagcag
cgcaaacaggcactagcgatttttgaggcggccaaaaatcagcccaaggagtctgcataa
DBGET
integrated database retrieval system
