Sandaracinus amylolyticus: DB32_004757
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Entry
DB32_004757 CDS
T03935
Name
(GenBank) 3'-to-5' oligoribonuclease (orn)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
samy
Sandaracinus amylolyticus
Brite
KEGG Orthology (KO) [BR:
samy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
samy03019
]
DB32_004757
03009 Ribosome biogenesis [BR:
samy03009
]
DB32_004757
Messenger RNA biogenesis [BR:
samy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DB32_004757
Ribosome biogenesis [BR:
samy03009
]
Eukaryotic type
Pre-60S particles
RNases
DB32_004757
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AKF07608
UniProt:
A0A0F6W585
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All DBs
Position
5491218..5491772
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AA seq
184 aa
AA seq
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MPVESDLLVWMDLEMSGLAIERERILEIAVIVTDGQLEILAEGPEIVVHQPDSLLDAMDD
WNKQHHGASGLVDRVRASTISEAEAERQVLEFVAAHVPARAAPLAGNSVHQDRLFLAKYM
PQVEKYLHYRNVDVSTLKELVRRWHPQAYAGRPTKRGSHRALGDIRESIDELRYYRRAVF
VPST
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcgagagcgatttgttggtgtggatggacctcgagatgagcgggctcgcgatc
gagcgcgagcgcatcctcgagatcgcggtgatcgtcaccgacgggcagctggagatcctc
gcggagggcccggagatcgtggtgcaccaacccgactcgctgctcgacgcgatggacgac
tggaacaagcagcaccacggcgcgtcggggctcgtcgatcgcgtgcgcgcgtcgacgatc
tcggaggccgaggccgagcgtcaggtgctcgagttcgtcgcggcgcacgtgccggcgcgc
gcggcgccgctcgcgggcaacagcgtccaccaggatcgcctcttcctcgcgaagtacatg
ccgcaggtcgagaagtacctgcactaccgcaacgtcgacgtctcgacgctcaaggagctc
gtgcgtcgctggcacccgcaggcctacgcgggccgtccgacgaagcgcggctcgcaccgc
gcgctcggcgacatccgcgagtcgatcgacgagctgcgctactaccgtcgcgcggtgttc
gttccgtcgacctga
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