Sandaracinobacteroides saxicola: H3309_16040
Help
Entry
H3309_16040 CDS
T06739
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sand
Sandaracinobacteroides saxicola
Pathway
sand03420
Nucleotide excision repair
sand03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sand00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H3309_16040
03430 Mismatch repair
H3309_16040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sand03400
]
H3309_16040
Enzymes [BR:
sand01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H3309_16040
DNA repair and recombination proteins [BR:
sand03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3309_16040
MMR (mismatch excision repair)
Other MMR factors
H3309_16040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QMW22786
UniProt:
A0A7G5IHE4
LinkDB
All DBs
Position
complement(3200171..3202438)
Genome browser
AA seq
755 aa
AA seq
DB search
MASVHPLASEPDWLSSLNPPQREAVLTTEGPVLMLAGAGTGKTKALTARLAWILANRLAW
PSELLAVTFTNKAAREMRHRLGTMIGPAAEGMPWLGTFHAIAAKMLRRHAELVGLKSNFT
ILDTDDQLRLLKQVIAEANLDEKRWPAKALAGLIDRWKNKGQVPADVPAGESFAFADGQG
ATLYARYQERLATLNAADFGDLLLHGIVILERHADLRAEWQRKFKYCLVDEYQDTNAAQY
RWLKLLVGERHNLCCVGDDDQSIYSWRGAEVSNILRFEKDFPGARIIRLEQNYRSTPHIL
AAASGVIAKNSGRLGKTLWTAMNGGEKVNVVGVWDGPEEARLVGERIERLAREGAGLEQV
AILVRAQHQTREFEDRFIAIGLPYRIVGGFRFYERAEIRDALAYLRLVNSADDALAFERI
VNVPKRGLGDKAQALIAAHARATGSSLSHAAAGIIETDELPAAARRNLATLVGDLRRWRA
MADTTPHPELAQIILEECGYVAALQADKSAEAAGRLDNLAELVRAMEVYDDLQAFLEHVS
LVMDNDRSEGEAKVTIMTLHAAKGLEFDHIFLPGWEEGLFPSQRALDEGGQASLEEERRL
AYVGITRARRRATILHAANRRVYGQWTSSIPSRFVAELPAEHVESETTLSGGPSLWRAAL
GDGDPFAHLERGSGRGPGWERAASRGVKRPGVIEGRATHVTVGGRARGEFAVGVRVFHQK
FGQGTVRAVDANKLTVSFDASGDKLVLDSFVEPLG
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggtacatcccctggcaagcgaaccggactggctatccagcctgaacccgccg
cagcgcgaggcggtgctgaccaccgagggcccggtgctgatgctggccggcgccggcacc
ggcaagaccaaggcgctgacggcgcggctggcgtggatcctggcgaaccggctggcctgg
ccgtcggagctgctggccgtcactttcaccaacaaggcggcgcgggagatgcggcaccgg
ctgggcacgatgatcgggccggcggccgagggtatgccgtggctggggacatttcatgcc
atcgctgcgaaaatgctccgccgtcatgccgagctggtcggactgaagagcaacttcacc
atcctcgacaccgacgatcagctgcgtctgctgaaacaggtgatcgccgaggcgaacctg
gacgagaagcgctggccggcgaaggcgctggccgggttgatcgaccgctggaagaacaag
ggccaggtgccggcggatgtgcccgcgggggagagtttcgccttcgccgacgggcagggg
gcgacgctctatgcccgctatcaggaacggctggcgacgctgaacgccgccgatttcggc
gatctgctgttgcacggcatcgtcatcctggaacgccacgccgacctgcgcgccgaatgg
cagcgcaagttcaaatattgcctggtggacgagtatcaggacaccaacgccgcgcagtat
cgctggctcaagctgctggtcggcgaacgccacaacctgtgctgcgtgggagacgacgac
cagtcgatctacagctggcgcggcgcggaagtgtcgaacatcctgcgcttcgagaaggac
tttcccggcgcacgcatcatccgtctggaacagaattaccgttccacgccgcatatcctg
gcggcggcctcgggcgtgatcgcgaagaacagcggccggctgggcaagacgctgtggacc
gcgatgaacggcggcgagaaggtgaatgtcgtcggcgtgtgggacggcccggaggaggcg
cggctggtcggcgagcggatcgagcggctggcgcgcgaaggggcggggctggagcaggtg
gccatcctggtgcgcgcgcagcatcagacgcgggagttcgaggatcgcttcatcgccatc
ggcctgccctatcgcatcgtcggcggctttcggttttacgagcgcgcggaaatccgcgat
gcgctcgcctatctgcggctggtgaacagcgccgacgatgcgctggcgttcgagcggatc
gtgaatgttcccaagcgcggcctgggggacaaggcgcaggcgctgatcgccgcgcatgca
cgcgccaccggcagcagcctgagccacgccgccgccggcatcatcgagacagacgagctg
ccggcggcggcgcggcgcaacctggcgacgctggtcggcgacctgcggcgctggcgggcg
atggccgacaccacgccgcatcccgagctggcgcagatcatcctggaggagtgtggctat
gtcgccgccctgcaggccgacaagagcgccgaggccgcgggccggctggacaacctcgcc
gaactggtgcgcgcgatggaggtttatgacgaccttcaggcctttctggagcatgtcagc
ctggtgatggacaatgaccggtcggaaggcgaggcgaaggtgaccatcatgacgctgcac
gccgcgaaaggcctggagttcgaccatattttcctgcccggctgggaggaggggctgttc
cccagccagcgcgcgctggacgaaggcggacaggcgtccctggaggaggaacggcggctg
gcctatgtcggcatcacccgcgcgcggcggcgcgccaccatcctgcatgccgccaaccgt
cgggtctatggccagtggacgtccagcattcccagccgcttcgtcgccgagcttccggcg
gagcatgtcgagagcgaaaccacgctgtccggcggccccagcctgtggcgcgcggcgctg
ggggatggcgacccgttcgcgcatctggaacgcggctccgggcgcgggccagggtgggag
cgtgcagccagccgcggcgtcaagcgtcccggcgtgatcgagggccgggcgacgcatgtc
accgtcggcggccgcgcccgcggcgaattcgccgtgggcgtgcgggtgttccaccagaag
ttcggccaaggcacggtgcgcgccgtcgacgccaacaagctgaccgtcagcttcgacgcc
agcggcgacaagctggtgctggacagcttcgtcgagccgctgggttag
DBGET
integrated database retrieval system