KEGG   Sinocyclocheilus anshuiensis: 107654268Help
Entry
107654268         CDS       T04917                                 

Definition
(RefSeq) DNA ligase 4-like
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    107654268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sanh03400]
    107654268
Enzymes [BR:sanh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     107654268
DNA repair and recombination proteins [BR:sanh03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     107654268
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_IV BRCT_2 BRCT RNA_ligase RTT107_BRCT_5 mRNA_cap_enzyme APG17
Motif
Other DBs
NCBI-GeneID: 107654268
NCBI-ProteinID: XP_016296776
LinkDB All DBs
Position
Unknown
AA seq 910 aa AA seqDB search
MMEGASKSDATPQTAVAAQVPFIDLCTVLENIQKTKLRPDKGKILKDFIDSWRNFHAALH
KDNSNTTDSFYAAMRLIVPQFERERMAYGIKENMLAKLYIEVLGLPKNGPDANKLLNYRT
PTTSQGEAGDFALMAYFVLKKRCTSQGNLSIKEVNDFLDSVAINNASKQKDQVKKSLLHL
ITQSSALEQKWLIRMILKDMKLGISKETVLQVFHPDAPELYNVTTDLNKVSRQLHDPSVS
LSEVSIDLFSAFKPMLAAVANIRQIEKQMGNRTFYIETKFDGERIQLHKAGDVYKYYTRN
SYEYTQQFGASPLEGSLTPYIHNVFKPHVVNCILDGEMMAYNPTTETFMQKGSKFDIKRL
MDDSDLQTCFCVFDVLLVNNQKFANEPLKKRYEILETVFTPIKGRIQLVTKSEGKTMQEV
VNSLNEAIDNLDEGIMVKDPMSIYKPDKRGEGWVKIKPEYVDGLMDELDLLIVGGYWGKG
RRSGMLSHFLCAVAEVPSPGEKPTVFHTLCRIGSGYTMKELYDLGLKLAKHWKVYNRNNP
PAAILCGTEKPEVYIEPRNSVIIQVKAAEIVSSEMYKTNCTLRFPRIERIREDKEWYECM
TLAELSQFRSRASGKLASRHLHIQEDQPEKKKHKFVAKPKKTIGVIDHFKSQDLSAVTKE
MDMFEDVEFCVINGNDEYSKAELEKVVARCGGIVVQNPGKDTYCVIAAAHNMRVKNLISS
DQHDVVWATWLLECLENKQVIPWQPRHMIHMSPSTRNHFAKEYDRYGDSYYVDTDEQQLR
EVFERIGPTEAECSSVAQIEAENAWDDLPTSIFRPCTAYFDRCADLGDPKTIIRGTSLDT
CALEFRFHGGTVVEKLKEGISHVIVESERRTLGLKTLRRLYAKKFKIVRESWVTDSIKAG
HVEDETDYLI
NT seq 2733 nt NT seq  +upstreamnt  +downstreamnt
atgatggaaggtgcctcaaaaagtgatgccacaccacagacggctgttgctgcacaagtt
ccgttcatcgacctctgcacagttctggagaacatccaaaagaccaaactccgaccagac
aaaggcaaaattctaaaggattttattgattcttggaggaacttccatgcagcgcttcac
aaggacaattccaataccacagattcattttacgcagccatgcgtcttattgtgcctcaa
tttgaacgagagcgaatggcttatggtataaaagaaaacatgcttgccaaactatatatt
gaagttttaggcctgcctaaaaatggacctgacgcaaacaaactcctaaattatagaact
ccaaccacaagtcaaggagaagcaggtgactttgcccttatggcctacttcgtcctgaaa
aaaaggtgtacaagtcaggggaatttaagcattaaagaagtcaatgacttcttggattcc
gtagctatcaacaatgccagcaaacagaaggatcaagtgaagaaaagccttttgcatctg
ataacccagagttcagctttggaacagaagtggctcattagaatgatcctcaaggacatg
aaacttggcattagcaaggagacagtacttcaggttttccatccagatgcaccagaactc
tacaatgtcaccacagatctgaataaagtcagccgacaacttcatgatccatctgtgtcc
ctcagtgaggtctccatcgatctgttttctgcttttaaaccaatgctggctgctgttgcc
aacatcagacagatagagaagcaaatgggcaaccggacattctatattgagactaagttt
gatggtgaacgcattcagctgcacaaagctggagatgtttacaaatactataccaggaac
tcttatgagtacacacaacagtttggggcctctccactagagggctccctcactccatac
attcacaacgtcttcaaacctcatgtggtaaactgcatattggatggagagatgatggct
tataaccccacaactgagaccttcatgcagaagggcagtaagtttgatattaaaaggctg
atggatgactctgatttgcaaacctgcttttgtgtatttgatgtcttgttagtaaacaat
cagaagtttgcaaatgagcctctcaagaagcgctacgaaattcttgagactgtcttcaca
ccgatcaaaggtcgtatccagttggtcacaaaatctgaaggcaaaaccatgcaagaagtg
gtgaattctctcaatgaggccattgacaatctggacgaggggattatggttaaggatccc
atgtccatctacaaaccagataaacggggcgaaggatgggtgaaaattaagcctgaatat
gtagatggtctgatggatgaacttgatctgctgatagtgggaggctactggggtaaaggc
aggagaagcgggatgctctctcattttctgtgtgcggtagcagaggtgccgagtccaggg
gagaagcccacagtgttccacaccctctgccgcattggatcaggctacactatgaaagaa
ctgtacgatcttggtctgaagttggccaaacattggaaagtttacaacagaaataatcct
ccagctgccatcttgtgtggaacagaaaaaccagaggtttacatagaaccacgcaactca
gtgatcatacaagtcaaagcggcagagatcgtctctagtgaaatgtataagaccaactgc
acattacgcttccccagaatagaaagaatcagagaagacaaagagtggtatgagtgcatg
accttggctgaactgagccagttccgctccagagcttctggaaagctggcttccagacat
ctacatatccaagaggaccagcctgaaaagaagaagcacaagttcgtagccaagcccaag
aagacaatcggagtcattgaccactttaaatctcaggatttatcagcggtcaccaaagag
atggatatgtttgaagatgtggagttttgtgtgataaatggcaatgatgaatattccaag
gcagagcttgagaaagttgtggcccgttgtggaggcattgttgtgcagaaccctgggaaa
gacacgtactgtgtgattgcagctgcgcacaacatgagagtaaagaacctcatctcctca
gaccaacatgatgtggtgtgggctacttggctgctggagtgtctggaaaataagcaggtt
ataccctggcaaccacgtcacatgatccacatgtcaccttccaccaggaaccacttcgct
aaagagtatgatcggtatggagacagttattatgttgacactgatgaacaacagctgagg
gaagtctttgaaaggataggccccacagaagctgagtgttcgtctgtggcacagatagaa
gcagagaatgcctgggatgacttgcccactagcatttttaggccttgcactgcttacttt
gaccggtgtgctgaccttggagatcccaaaaccatcatacggggtacaagtttggacacg
tgtgccttagaattccgattccatggtggtactgttgtggagaaactgaaggaaggaatc
tcgcatgtcatagtagaaagtgaaagaagaactctgggcttgaagacgttgaggcgactt
tatgctaagaagttcaaaattgttcgagaatcttgggtgaccgattctatcaaagcaggc
catgtagaggatgagactgactacttaatataa

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