Sinocyclocheilus anshuiensis: 107655662
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Entry
107655662 CDS
T04917
Name
(RefSeq) collagen alpha-6(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04510
Focal adhesion
sanh04512
ECM-receptor interaction
sanh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107655662
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107655662
09142 Cell motility
04820 Cytoskeleton in muscle cells
107655662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sanh04147
]
107655662
00536 Glycosaminoglycan binding proteins [BR:
sanh00536
]
107655662
Exosome [BR:
sanh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107655662
Glycosaminoglycan binding proteins [BR:
sanh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107655662
Hyaluronan
Extracellular matrix or blood plasma proteins
107655662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
Motif
Other DBs
NCBI-GeneID:
107655662
NCBI-ProteinID:
XP_016298713
LinkDB
All DBs
Position
Unknown
AA seq
1809 aa
AA seq
DB search
MEGGGTRTDLGLREMIPLFEEAVRTRGEKVRKLLIVITDGESRGTEESVEVPAKLLRTEQ
NVTIYAIGVKDASEPELELISGSQQRTFYVKNYDFLDEIKKDIITEICSFEGCEGLFADV
VFLLDGSESVSAKDFENMKDIMKLVIDRFVIGPDKERVAVVQYGTDPKEEFSLNTFDDKA
VLLQKIRNIEQMNGKMYTGKALKEVLQSFNISKGGRASALKFLILLTDGESRDDVSEPAK
VLRDNFININAIGMRHANKSQILAIAGSHDGVFFEDAVASPKELSNDILLKICNTECKTP
ELIDIIFLMDASGSPNKDGFQEMINLMKYTVSKSVVGEKRVRFGAVTYSNNPHSEFTLKQ
YYSQTDILRVISNLKTSGGSRNTVRALNYTLSYFGGTHGGRRAKNVPQVLFLITDGKVND
LSGLATWLESLANSEVNFFAIGTEDADAEQLKEMVGKKGTVHYAKTYQDLRGLQKRITQE
LCDLTKPICEMEVSDLVFLIDGSESIDEPSWNTLKKTMIGIVRELDIAQDKWRVGVAQFS
DILLHHFYLNTYTSFAEVEEAINKIRQRKQGTSTWDALRNIRYYFTRENGSRIDERVAQN
LLLITDGKANDEKDLNALAYLRNKNITITAIGIGDEIKKSELREIAGSADRVLIETFEGL
ELKTTIRKVLNLLCTDTRPIPQPPYDCDIDIAFGFDVSRRTSTQTLFRPQVEPLVSAAIH
HISMMGDLCCIKKGKITTRFGYRLDRSVLNDFGFEKYSEDVVKKVMSFQPTAPLSFNGVL
LDSFRELLASSKAKAKVLIIFTDGLDDNIKHLMASSERLKQSVETVALRKCCDVPCSCTG
VPGPRGHPESSGQKGYKGQKGHPGFPGDEGSMGERGPPGLNGTQGHNGCPGNRGIKGQRG
YTGNKGEDGEDGLDGVDGEQGDAGLNGLPGPKGDPGSAGVKGFRGSPGPKGHSGVRGDPG
APGIDNTIPGPKGERGDTGLPGDQGTVGPPGSPGDNSDPGAPGRKGRPGLPGESSGEKGE
AGQLGLPGYPGQVGPPGSKGFQGDNGPPGAPGIQGPFGPPGPEGSKGGRGSRGPRGPPGD
PGPKGTLGPEGFKGPLGQDGRDGYGPAGLKGHKGNIGYFGLPGLQGEDGTKGSSGSKGHK
GYRGKPGNTGLRGPPGAPGENGMDGHRGEKGAPGISPMPECDLVEHIRKNCPCCSGNGTR
CPVYPTDLVIALDMSAGVTPQVFERMSSAAQSLLEDISIAETNCPWGARVSVISYSSESR
NLIRFADHPKKKSLLEAVRTFALERTTKTRDIGQAMSFVARNIFKRVRKGRLMRKVAVFF
TNGPSRDESSLATAMLEFKAADIGLGVIAFNPADDVSRAMQVDDTGSYIIVDGRGVNRIK
QCIICFDRCNPDPVCGVIRPPPLQMDLDMSVLLDGSDNLNTQQYVNTKELLLSLLDRIGV
SSEPSRADGKTRVSVYQQSSVYGSSYISEEFSFTTFKDRNIMKRHITNTVKQVGGTSHPE
FALERLITNIILKAERPRSKRMVMAVFGEDSEHSKAQLDYLSRLCKCQNVVMFILMAGQR
FDWTQMEELTSSPLEQHLVFLDDRDYGTRFAYAFLHMLHNILPTEAPTEEPFTTEEPLEE
YEDVYDQQNTEPITEPSQLDDTEQFTEEHKEDKTEPSKTKARCFLEKDSGGACGSYMSRW
YYSQQTKKCMHFWYGGCGGNENRFLTEDECFRECVSTGHLPVKSFEIVQTSSTESENPPK
DDSSIKDICQLKLDAGSCSNFSVKWYFNVRSGGCVQFWYGGCDGNSNRFDTQEDCEIRCL
RAKKVSPNI
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atggagggagggggcaccaggactgatttggggttgagagaaatgatcccgctattcgaa
gaagctgtacgaacacgtggggaaaaagttcgtaagctcctgattgtcatcacagatggc
gagtcgagagggacagaagagtcggtagaagtccctgctaaacttctgagaacagaacag
aatgtcaccatttatgctattggtgtgaaagatgcatctgagccagagctggaattaata
tctggcagccaacaaagaacattttatgtcaaaaactatgatttccttgatgaaatcaag
aaagacatcattacagaaatatgctcctttgaaggttgtgaaggtctttttgcagatgtt
gtcttcctgcttgatggatcagaaagcgttagtgctaaggactttgaaaatatgaaggac
ataatgaagcttgtgatagataggtttgtaattggaccggacaaggagcgtgttgcagtt
gttcagtacggcacagacccaaaggaggagttttccttaaatacatttgatgataaagct
gtattattacagaaaattagaaatattgaacagatgaatggaaaaatgtacactggaaaa
gcacttaaagaagtattacaatctttcaacatttctaaaggaggacgcgccagtgcttta
aagttcttgatacttcttacagatggagagagtagggatgatgtatctgagcctgctaaa
gtcttgagagacaatttcatcaacattaatgctattggtatgagacatgcaaacaaatct
cagattcttgccattgctggatcccatgatggagtgttctttgaagacgcagttgcatcc
ccaaaagaattaagcaatgacatccttctaaagatctgcaacacagaatgcaagacacca
gaattgatcgatataatcttccttatggatgcctccggaagtccaaataaagatggtttc
caggaaatgataaacttaatgaaatatacggtgagcaaatctgtggttggagaaaaacgg
gtacgatttggagctgtcacctactctaataaccctcattcagagttcacactaaaacag
tactacagtcaaactgatattctgagggttatctcaaacctcaaaacttcaggaggaagc
agaaacacggtccgagccctgaactatacactctcctactttggtggaacacatggtgga
cgacgggcaaagaatgttccccaagtgctatttctgattacagacggcaaggttaatgac
ttaagtggtctggcaacatggcttgaatccctggcaaattcagaggtcaacttttttgct
attggtactgaagatgcagatgcagaacagctaaaggagatggtgggaaagaaaggaaca
gtgcactatgcaaagacctaccaggatctgcgtggactacaaaaacggatcacccaagag
ctctgcgatcttaccaaaccaatttgtgagatggaggtatcagaccttgtttttttaatt
gatggatcagagtctattgacgaaccaagttggaatactctcaaaaaaaccatgattggc
attgtgagagagctggatattgctcaagacaaatggcgagtgggtgttgcccagttcagc
gatatactcctgcatcacttttacctgaacacatacactagttttgcagaagtggaggaa
gctataaacaaaattagacaacgaaagcagggtacaagtacttgggacgcactgagaaat
attagatactacttcacaagagagaatggatccagaatagatgaaagagtcgctcagaat
ctcctgctgatcacagatggaaaagctaatgatgagaaagacttgaacgcattagcgtat
ctcagaaacaagaacataacaataactgccattgggattggcgatgaaataaagaaatct
gaactgcgtgaaatagctggatcagctgatcgggtccttattgagacttttgaaggcctt
gaactgaagacaactataaggaaagtgttaaatttactctgtacagacacaagaccaata
ccacaacccccatatgactgtgatattgacattgcctttgggtttgacgtgtccagacga
acaagcacgcaaactctgttcagacctcaggtggaaccgttggtttctgcagccatccac
catatctccatgatgggtgatctgtgctgcatcaaaaagggcaagattacaactagattt
ggctataggctagataggagtgttctgaatgattttggctttgagaagtacagcgaggat
gtggtcaagaaagtgatgtcatttcaacctacggcacccctgtccttcaacggggttctg
ttagattccttcagagaactgttagcctcctccaaagccaaggcaaaggttttgataatc
ttcacagatgggttggatgataacattaagcatttaatggcgagttcagagagacttaag
caaagtgtggaaacagtagcgctgaggaaatgctgtgatgtgccttgttcgtgcaccggt
gtacctggaccacgaggacaccctgaaagctcgggtcaaaagggatataaaggtcagaag
ggtcatcctggatttccgggagatgaaggtagtatgggagagcgaggaccaccagggctg
aatggaactcagggacacaacggttgccctggaaacagaggcataaagggccagagaggc
tacactggaaataaaggagaagatggggaggatgggctggatggagtggatggagaacag
ggtgatgctggcctaaatgggcttccaggacctaaaggagacccaggcagtgctggtgtg
aagggtttcagaggcagtcctggacctaagggacacagcggagtgagaggagatcctggt
gcaccaggaatagacaacacaattccaggtccaaaaggcgagaggggagatactgggctc
ccgggtgaccagggcactgttggacccccaggcagccctggagataacagtgatcctggt
gctccaggaagaaaaggccgaccaggattgccgggtgaatcttcaggtgaaaaaggagaa
gctggacagctagggcttcctggttatcctggacaagtgggaccaccaggctcaaaaggg
ttccaaggagacaatggtcctccgggtgcacctggaattcagggtccctttggcccacct
ggacctgaaggttcaaagggaggtcgaggatccagagggccaaggggtccaccgggtgac
ccagggcccaagggaacactgggaccagagggattcaaagggcctctgggacaagatgga
agagacgggtatggacctgcagggctcaaaggacacaagggaaacattggatactttggc
ctccctggtttgcagggtgaggatggtaccaaaggatccagtggaagtaaaggacataaa
ggttatcgaggaaaaccgggaaacactggtctccgaggtcctccaggtgctccaggagag
aatgggatggacggacacaggggtgaaaaaggagctcctggaatcagtccaatgcctgaa
tgtgacctggtcgaacacatacgcaaaaactgtccttgctgctccggtaatggtacccgg
tgtccagtttaccccacagacctggtgatagcattggacatgtctgcgggtgtgactcct
caagtgttcgagcggatgagttctgcggcccaatctttattggaagacatttccattgct
gaaacaaattgtccatggggagctcgagtgtctgtgatctcctacagcagcgagtccagg
aacctgatccgtttcgcagaccaccctaagaagaagagccttctggaagctgtaagaaca
ttcgcgctagagagaaccacaaaaactagagacatcggacaagccatgagctttgtggcc
cggaacatcttcaaacgtgtccgaaagggcaggcttatgaggaaagtggccgtgttcttc
acaaacgggccgtcgagggatgaatcgagccttgcaacagccatgctggagttcaaggct
gcagatattggcctcggagtgatcgccttcaatcctgctgatgatgtgagccgagcaatg
caggttgatgacacaggaagctacattatcgttgatggcagaggagtaaatcgcattaaa
cagtgcatcatttgttttgatcgttgtaacccagacccagtgtgcggtgtaatccggcct
ccacccctgcagatggatttggacatgtctgtgctgctggatgggtctgataacctgaac
actcaacagtatgtaaacacgaaggagctcctgctgtctctgttggaccggatcggtgtg
agcagcgagccgagcagagccgacggaaaaaccagagtgtccgtctaccagcagagctcc
gtttacggctcatcttacatcagcgaggagttcagcttcaccacatttaaagatcgcaat
atcatgaagaggcatattactaatacagtgaagcaagtgggcgggacatcccatcctgag
tttgctttggagaggctgattactaacattatccttaaagcagaaagaccacgaagcaaa
cgaatggtcatggctgtttttggtgaagattcggagcacagcaaagctcagcttgattat
ttgtctagactgtgtaagtgtcagaatgttgtgatgtttatcctcatggcgggacagaga
ttcgactggacacagatggaggagctcaccagttctcctctggagcagcacctggtgttc
ctggatgacagagattatggcacacgcttcgcttacgccttcctgcatatgctccacaat
attctgcccactgaagcgcccaccgaagagcccttcacaacagaggaacctctggaggaa
tatgaagatgtttatgatcagcaaaacacagaaccaatcactgaacccagtcaacttgat
gacactgaacaatttacagaagagcacaaagaggacaaaacggagccctcaaagactaaa
gcacgatgcttccttgagaaagattcaggcggtgcttgtggatcgtatatgtccagatgg
tattacagccagcagactaagaaatgcatgcacttctggtacggtggttgtggcggaaat
gaaaaccgattcttgacagaggatgagtgctttagggaatgtgtgtctacaggccattta
cctgtaaagagttttgagattgttcaaacttcctccacagaatctgaaaatcctccaaag
gatgattccagtatcaaggacatttgccagctcaaactcgatgcaggatcttgctcaaac
ttttcagtgaaatggtacttcaacgtccgcagtggtggatgtgtccagttctggtacgga
ggctgtgacgggaacagcaacaggttcgacactcaggaggactgcgagattcgctgtctc
agggccaaaaaagtatctccaaacatctaa
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integrated database retrieval system