KEGG   Sinocyclocheilus anshuiensis: 107691772Help
Entry
107691772         CDS       T04917                                 

Definition
(RefSeq) DNA ligase 3-like
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
sanh  Sinocyclocheilus anshuiensis
Pathway
sanh03410  Base excision repair
Module
sanh_M00296  BER complex
Brite
KEGG Orthology (KO) [BR:sanh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107691772
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sanh03400]
    107691772
Enzymes [BR:sanh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     107691772
DNA repair and recombination proteins [BR:sanh03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     107691772
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 107691772
NCBI-ProteinID: XP_016346072
LinkDB All DBs
Position
Unknown
AA seq 1011 aa AA seqDB search
MPSLWLGRAVRTLSRSSLPNLCRETSFRGTLNHPSLQCSRTLIFSWGFASSPSGIFFCVP
QIRQFSLSSSSYFHVSWPEWQSGRPVMAEQRYCVEYAKRGTAGCKKCKDKIMKGLVRVGK
IVPNPFSESAGEMKEWYHVKCIFEKLERARATTKKIDDITELEGWEELQDEDKELINKHV
SELAAKANASPKKKAQAKLNNSGQLSAPLTDPTVNAPRKFSGFTATKAGSSSSSPGPSPA
KPTQGSAKSAQLCDPNHKDCLLREFRKLCALVSEKSSYNAKTEIIRDFLTKGSGGDKFRG
DLYLTVKLLLPGVVKNVYNLNDKQIVKLFSRILNCSQDEMVQDLEQGDVSETVRMFFEDS
KSFPPAAKSLLTIQEVDASLSRLSQLTKEDDQHAELQDIAKKCTGNDLKCYIRLVKHDLK
INSGAKHVLDAVDPNAHDAFKASRNLGDVIDRVLRNQQDASNGTGPRKILSVEASLMTPV
QPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKNGNHFSYFSRSLKPVLPHKVAHF
KDFIPQAFPGAHSMILDAEVLLIDTKTSKPLPFGTLGVHKKAAFQDAQVGLFVFDCIYFN
GVSLMDKPLCERRKFLHDSMVEVPNRILFSEMKHVTRAADLAEMITRVIREGLEGLVLKD
IKGHYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGGIMSSFLMGCYDPESK
KWCTVTKCSGGYDDATLARLQKELDVIKIGKDPSKIPGWLKIVKNYYPDFIIRDPEKAPV
WEITGAEFSKSEMHTADGISIRFPRCTRMRDDKDWKTATNLQQLKELYRISKENCDFEVT
AGPSKTSQNDKSSSGGESGGNSLSASHGASTANKTKNGHAPKAKAVKTESSSPAVKRKLP
AEKQDAKKIKTEPVHSNGQSKLKTVQTTDPKNEKTLLDIFTGVKLYLPESVQDFEKLRRY
FLAYDGDLVPEYDSASATHTLGEPEDDRSAQRVTSNWIWECIRKRRVVPPC
NT seq 3036 nt NT seq  +upstreamnt  +downstreamnt
atgcccagtctttggcttggcagggcagtgaggacactcagcagatcatctttgccaaac
ctttgtagggaaacttcatttagaggaacactaaatcatccatctctccagtgctccagg
actcttatattttcttggggctttgcatctagccccagtggcatctttttctgtgtgcca
caaattcgccagtttagtctcagctccagctcttatttccacgtttcttggcctgagtgg
caaagtggacgaccagtcatggcagagcagagatactgtgtggaatatgccaaacgtggc
acggctggctgcaagaaatgcaaagacaagatcatgaaggggctggtccgggttggcaag
atagtgccaaacccattcagtgagtctgcaggagaaatgaaggagtggtaccacgtgaag
tgcatctttgagaagcttgagagagcacgtgccaccacgaagaaaatcgacgacatcaca
gagctggagggatgggaggaacttcaggatgaggataaagaactaatcaataaacatgtt
tcagagctggcagccaaagccaatgcatccccaaagaagaaagcgcaagcaaagttaaat
aacagtgggcagctgtcagcaccgctaactgatccaacggtcaatgctcctcgcaagttt
tctggctttacagctaccaaagccggttcctcttcctccagtcctggaccatctccagcc
aaacccactcagggtagtgctaaatcagctcagctatgtgatcccaaccataaagactgc
ttactgcgggagttccgcaaactttgtgccttagtctcagagaagtccagctataacgcc
aagacagagatcatcagagacttcttaacaaaaggctctggtggagacaaattccgagga
gatttgtacctgacagtgaagcttctcctcccaggagtggttaagaatgtgtacaacctc
aatgacaaacaaattgtcaagcttttcagccgcatattgaattgcagtcaggatgagatg
gtgcaagacttggaacagggtgatgtttcagagacggtgcggatgttttttgaggacagc
aagtctttccctccagcagccaagagtcttctaactattcaggaggttgatgcttcactg
agccgtctgtcccaactcacaaaggaggatgaccagcacgcagagctgcaggatattgct
aaaaaatgcaccggaaatgatctgaagtgttacattcgtttggtcaaacatgatctgaaa
atcaactctggggctaagcatgttttggatgctgtggaccccaacgcccatgatgccttc
aaagcctctcgtaacctgggtgacgtaattgaccgggtgctacggaaccagcaggatgct
tctaatgggacagggcccagaaaaatcctcagcgtggaggcgtctctgatgacccctgta
cagccaatgctggcagaagcatgtaagtccatcgagtatgccatgaagaaatgtcctaat
gggatgtattctgagatcaagtatgatggcgagcgtgtgcaggtccacaagaacggcaat
cacttcagttacttcagtcgaagtctcaaaccagtactcccacacaaggttgcccatttt
aaagatttcataccgcaagcatttcctggtgcccatagtatgatccttgatgctgaagtt
cttcttattgatacaaagactagcaaaccactgccttttgggactcttggggtacacaag
aaagcagctttccaggatgctcaagtgggtctgttcgtgttcgactgcatttatttcaat
ggtgtcagtctcatggacaagcctctctgtgagagaagaaagtttctccatgacagtatg
gtggaagttcctaacaggattctgttctcagaaatgaagcatgtcacgagagctgctgat
ctggcagaaatgatcacacgtgtcatcagagaaggacttgagggtttggttctgaaggat
atcaaggggcattatgaaccaggaaaacgtcactggttgaaggtgaaaaaggactatctg
aacgaaggagcaatggcggacaccgctgacctcgtggtgcttggtgctttctatggcaaa
ggctcaaatggtggaattatgtccagtttccttatgggatgctatgacccagaatccaag
aagtggtgcactgtgaccaagtgttcaggaggctatgacgacgccaccttagccagactg
cagaaggagttggacgtcatcaaaattggcaaggatccaagcaagatcccaggatggttg
aagatcgtcaagaactattacccagatttcattatccgagatccagaaaaagcaccagtg
tgggaaataacaggagctgagttttccaaatcagaaatgcacactgcagatggcatatcc
atccgcttcccacgatgcactcgaatgcgagacgacaaagattggaagaccgccactaac
cttcagcagctcaaggagctgtatcgtatttcaaaggagaactgtgattttgaggtgaca
gctggtccgtccaaaactagccaaaatgacaagagctcctcaggaggtgagagtggagga
aactctctctctgcatctcatggagcttccacagctaacaagaccaaaaacggtcatgct
cccaaagcaaaggcagtgaaaacagaatcatcttctccagcagttaagaggaaactaccc
gcagagaaacaagatgccaagaagataaaaacagaacccgttcacagcaatggacaaagc
aaattgaagactgttcaaacaactgacccaaaaaatgaaaagacactactggacattttc
acaggcgtgaagctctacctcccagagtcagtgcaggactttgagaagcttcggcgctac
ttcctagcgtacgatggagatttggtgccagagtatgactctgcttcagccacacataca
ctgggagagccagaggatgaccgttcagcccagagggtcacctccaactggatctgggaa
tgcatccgaaagaggagggtggttcctccctgctga

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