Sinocyclocheilus anshuiensis: 107693549
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Entry
107693549 CDS
T04917
Symbol
ddx23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
3.6.4.13
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107693549 (ddx23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sanh03041
]
107693549 (ddx23)
Spliceosome [BR:
sanh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107693549 (ddx23)
Complex C
U5 SnRNP specific factors
107693549 (ddx23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
107693549
NCBI-ProteinID:
XP_016348460
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MAGDSDKKELEAAGKERESRKRSRSRSRDRDRKGSPGRERKRNRSRERKRSRSRSKSPDR
DRRQKDKERDRDRSRKDRERDRDRRDKDRSKKSRSTSPKSKDLKTKREKDVKKEEEEKDE
KKKEKVQPLSLEELLAKKKAEEEAESKPKFLSKGEREAEAIKRREQQTEERRRQVDEERK
KRRIFQDIGRKMLEDPQERERRERRERMERENNGNDEDDGRQKIREEKDKGKELQAIKER
YLGGMKKRRRTRHLNDRKFVFEWDASEDTSTDYNPIYKEKHQVQLYGRGFIAGIDLKQQK
RDQSQFYGDLMEKRRTLEEKEQEELRLKKVRKKEAKQRWDDRHWSQKKLDEMIDRDWRIF
REDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDIIG
VAETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAVILAPTRELAQQIEEETIKFGK
PLGIRTVAVIGGISREDQGFKLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADR
MIDMGFEPDVQKILEYIPVTNQKPDTDEAEDPEKMMQNFESGKHKYRQTVMFTATMPPAV
ERLARSYLRRAAVVYIGSAGKPHERVEQKVILMSEGEKRKKLLDVLASGFEPPIIIFVNQ
KKGCDVLAKSLEKIGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDV
SMVLNYDMAKNIEDYIHRIGRTGRAGKSGMAMTFLTKEDSSVFYDLKQAILESPVSTCPP
ELANHPDAQHKPGTILTKKRREETIFA
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgactctgataagaaggagctggaggccgcagggaaggagcgggagtctcgg
aagcgcagtcgctctcgctccagggatcgtgatcggaagggatctccgggcagagaacgc
aaacggaaccgatcccgtgaacgcaagcgctcccgcagcagatccaaatctcctgaccga
gatcgtcgtcaaaaagacaaagaaagagacagagacaggagccgcaaagacagagaaaga
gacagggacagacgggacaaagaccggtccaagaaatcaaggagcacttcccctaaatcc
aaggatttgaaaacaaagagggagaaggatgtgaagaaagaggaagaggagaaagatgag
aagaagaaagagaaggtgcagcctctctctcttgaagagctgcttgctaagaagaaagca
gaagaagaggcagaatctaagcccaagttcttgtctaaaggggagcgagaagctgaggcc
atcaaacggagggagcagcagacagaggaacgccgcagacaagtggacgaggagaggaag
aaacgaagaatatttcaggacatcggcaggaagatgctagaggatcctcaggagagagaa
cgacgggaaagaagggagcggatggaaagagagaacaatgggaatgatgaagatgatggg
cgacagaagattagagaagaaaaagacaaaggaaaagagctgcaggccataaaggagcgt
tatcttggtggtatgaagaaacggcggcgcacacgccatctgaatgacaggaagtttgtc
tttgagtgggatgcgtctgaagacacatcaaccgactacaatccaatctataaagaaaag
catcaggttcagctgtacggccgaggcttcatcgctggcatcgacctgaagcagcagaag
agagatcagtcccaattctacggagacctgatggagaagagacggacccttgaagagaaa
gagcaagaggaattgaggctgaagaaggtccgaaagaaggaggccaagcagcgctgggat
gaccggcactggtctcagaagaagctggatgagatgatagacagagactggagaatcttc
agagaggattacagcatcacgaccaaaggaggaaagatccccaaccccatccgcaactgg
aaggagtattcactgccgccacacattctggaggtcatcgaaaagtgtggatataaggat
cccacacctatccagaggcaggccattcctattggcctacagaaccgtgacatcattggt
gtggccgagactggtagtggtaaaaccgctgccttcctcattcctttattggtctggatc
accactctgcctaagattgacaggatcgaggactcagatcagggaccgtatgccgtcatt
ctggcccccactcgtgagctggcacagcagatagaggaggagacgattaaattcggcaaa
ccgctggggatccggacagtggctgtgatcggtggaatatccagagaggatcaaggcttc
aaactcaggatgggttgtgagattgtcatagccacacccggtcgtttgatcgacgtgttg
gaaaaccggtacctcgtcctgagcagatgcacgtatgtggtactggacgaagccgacaga
atgattgacatgggctttgaacccgacgtccagaagattctggagtacattcctgttacc
aatcagaagccagacacagatgaagcggaggaccccgaaaaaatgatgcagaactttgag
tcaggcaaacacaaatacagacagacagtcatgtttacggccactatgcctcctgcagtg
gagcgtttggccagaagctacctccgacgggctgcggtggtgtacatcggctctgcaggc
aaacctcacgagagagtggagcagaaggtcatcctcatgtccgagggtgaaaagaggaag
aagctgctggatgttttggcaagtggctttgagccgcccatcatcatcttcgttaaccag
aagaagggttgtgacgtgctggctaagtctttggagaagattggatacaatgcttgtact
cttcacggtggtaaaggtcaggaacagagagagttcgctctgtccaacctaaaggctgga
gctaaggacatcctggtggccacagatgtggcaggcagaggtatcgacatccaggacgtc
tccatggtcctcaactacgacatggctaagaacatcgaggactatatccatcgtattggc
cgaacgggtcgtgctggaaagagtggtatggcgatgaccttcctgaccaaagaagactct
tctgtgttctacgacctgaaacaggccatcttagaaagtcctgtgtccacctgcccgccc
gagctggccaatcacccagacgcccagcacaagcctggcaccatccttaccaagaagagg
agagaggagaccatctttgcctga
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