Salinispora arenicola: Sare_0002
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Entry
Sare_0002 CDS
T00613
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
saq
Salinispora arenicola
Pathway
saq03030
DNA replication
saq03430
Mismatch repair
saq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sare_0002
03430 Mismatch repair
Sare_0002
03440 Homologous recombination
Sare_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saq03032
]
Sare_0002
03400 DNA repair and recombination proteins [BR:
saq03400
]
Sare_0002
Enzymes [BR:
saq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sare_0002
DNA replication proteins [BR:
saq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sare_0002
DNA repair and recombination proteins [BR:
saq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sare_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
ABV95938
UniProt:
A8LVG9
LinkDB
All DBs
Position
2705..3838
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AA seq
377 aa
AA seq
DB search
MKFRVERDALAEAVAWTAKSLPSRPSVPVLAGVLLRVSDANLQVSGFDYEVSSQVTVEVQ
GDADGAALVSGRLLAEITKALPAKPVDIAAVGAHLELVCGSARFTLPTMPVEDYPTLPEM
PVSTGTVDAAAFAAAVAQVAVAAGRDETLPMMTGVRLELSGGTLAMLATDRYRLALREME
WNPDDPEITLNALVPARTLHDTAKALGSLGGQVTMALSQGAAGEGMIGFAGGTRRTTSRL
LDGANYPPVRSLFPATHNAQAQVPVSALIEVVKRVALVAERTTPVLLSFSGDGLVVEAGG
TEEARASEAMEATFTGDPLTVGFNPQYLIDGLSNMGTQSAVLSFVDAFKPAVISPVGEDG
EVVPGYRYLIMPIRVSR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaagttccgagtagagcgcgacgcgctcgccgaggccgtggcctggaccgcgaagagc
ctgccgagccggccgtcggtgccggtgctcgcgggggtgctgctgcgggtctccgacgcg
aacctgcaggtctccggcttcgactatgaggtctccagtcaggtgaccgtcgaggtgcag
ggggatgctgacggcgccgccctggtctccggccggctactcgccgagatcaccaaggcc
ctgccggcgaaaccggtcgacatcgcggcggtcggcgctcacctcgaactggtctgtggc
agcgcccggttcactctgcccaccatgccggtggaggactatccgaccctgccggagatg
ccggtcagcaccggcaccgtcgacgccgccgcgttcgccgccgccgtcgcccaggtggcc
gtggcggccggccgggacgagacgctgccgatgatgaccggtgtccggctcgagttgtcc
ggcggcacgctggccatgctcgccaccgaccgctaccggctcgccctgcgcgagatggag
tggaacccggacgacccggagatcaccctcaacgccctggtgccggcccgcacgctgcac
gacaccgccaaggccctggggtcgctcggcggccaggtgaccatggcgctctcccagggc
gcggccggcgagggcatgattggtttcgccggaggcacccgccgcaccaccagccggcta
ctcgacggcgccaactacccgccggtccgttctctcttccccgccacgcacaacgcgcag
gcccaggtgccggtcagcgcgctcatcgaggtcgtcaagcgggttgcgctggtcgccgaa
cgcaccactccggtcctgctgagcttcagcggcgacggattggtggtcgaggccggcggc
accgaggaagcccgggccagcgaagcgatggaggccaccttcaccggtgatccgctgact
gtcggcttcaacccccagtatctgatcgatggtctctcgaacatggggacccagtccgcc
gtgctgtcgttcgtcgacgccttcaaaccggcagtgatttccccggtcggtgaggatggc
gaggtcgtgcccgggtaccgctacctcatcatgccgatccgcgtctcacgctga
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