Staphylococcus aureus subsp. aureus MRSA252 (MRSA): SAR0548
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Entry
SAR0548 CDS
T00182
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' chain protein
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sar
Staphylococcus aureus subsp. aureus MRSA252 (MRSA)
Pathway
sar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAR0548 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sar03021
]
SAR0548 (rpoC)
03400 DNA repair and recombination proteins [BR:
sar03400
]
SAR0548 (rpoC)
Enzymes [BR:
sar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAR0548 (rpoC)
Transcription machinery [BR:
sar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAR0548 (rpoC)
DNA repair and recombination proteins [BR:
sar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAR0548 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
CAG39569
UniProt:
Q6GJC5
LinkDB
All DBs
Position
594519..598142
Genome browser
AA seq
1207 aa
AA seq
DB search
MIDVNNFHYMKIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
SCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRALEEVIYFASYVVVDPGPTGLEKKTLLSEAEFRDYYDKYPGQFVAKMGAEGIKDLLE
EIDLDEELKLLRDELESATGQRLTRAIKRLEVVESFRNSGNKPSWMILDVLPIIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPSLKMYQCGLPKE
MALELFKPFVMKELVQREIATNIKNAKSKIERMDDEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGAIFNNTNEVLKAYANGFVHLHTRIGVH
ASSFNNPTFTEEQNKKILATSVGKIIFNEIIPDSFAYINEPTQENLERKTPNRYFIDPTT
LGEGGLKEYFENEELIEPFNKKFLGNIIAEVFNRFSITDTSMMLDRMKDLGFKFSSKAGI
TVGVADIVVLPDKQQILDEHEKLVDRITKQFNRGLITEEERYNAVVEIWTDAKDQIQGEL
MQSLDKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEY
FISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMI
EPFIERIEGRYSKETIRHPETDEVIIRPDELITPEIAKKITDAGIEQMYIRSAFTCNARH
GVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRI
QEIFEARNPKGQAVITEIEGVVEDIKLAKDRQQEIVVKGANETRSYLASGTSRIIVEIGQ
PVQRGEVLTEGSIEPKNYLSVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLR
KVRIIEAGDTKLLPGSLVDIHNFTDANREAFKHRKRPATAKPVLLGITKASLETESFLSA
ASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVKYEKTAKPVAEVE
SQTEVTE
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtaaataatttccattatatgaaaataggattggcttcacctgaaaaaatc
cgttcttggtcttttggtgaagttaaaaaacctgaaacaatcaactaccgtacattaaaa
cctgaaaaagatggtctattctgtgaaagaattttcggacctacaaaagactgggaatgt
agttgtggtaaatacaaacgtgttcgctacaaaggcatggtctgtgacagatgtggagtt
gaagtaactaaatctaaagtacgtcgtgaaagaatgggtcacattgaacttgctgctcca
gtttctcacatttggtatttcaaaggtataccaagtcgtatgggattattacttgacatg
tcaccaagagcattagaagaagttatttactttgcttcttatgttgttgtagatccaggt
ccaactggtttagaaaagaaaactttattatctgaagctgaattcagagattattatgat
aaatacccaggtcaattcgttgcaaaaatgggtgcagaaggtattaaagatttacttgaa
gagattgatcttgacgaagaacttaaattgttacgcgatgagttggaatcagctactggt
caaagacttactcgtgcaattaaacgtttagaagttgttgaatcattccgtaattcaggt
aacaaaccttcatggatgattttagatgtacttccaatcatcccaccagaaattcgtcca
atggttcaattagatggtggacgatttgcaacaagtgacttaaacgacttataccgtcgt
gtaattaatcgaaataatcgtttgaaacgtttattagatttaggtgcacctggtatcatc
gttcaaaacgaaaaacgtatgttacaagaagccgttgacgctttaattgataatggtcgt
cgtggtcgtccagttactggcccaggtaaccgtccattaaaatctttatctcatatgtta
aaaggtaaacaaggtcgtttccgtcaaaacctacttggtaaacgtgttgactattcagga
cgttcagttatcgcggtaggtccaagcttgaaaatgtaccaatgtggtttaccgaaagaa
atggcacttgaactatttaaaccatttgtaatgaaagaattagttcaacgtgaaattgca
actaacattaaaaatgcgaagagtaaaatcgaacgcatggatgatgaagtttgggacgta
ttggaagaagtaattagagaacatcctgtattacttaaccgtgcaccaacacttcataga
cttggtattcaagcatttgaaccaactttagttgaaggtcgtgcgattcgtctacatcca
cttgtaacaacagcttataacgctgactttgatggtgaccaaatggcggttcacgttcct
ttatcaaaagaggcacaagctgaagcaagaatgttgatgttagcagcacaaaacatcttg
aaccctaaagatggtaaaccagtagttacaccatcacaagatatggtacttggtaactat
taccttactttagaaagaaaagatgcagtaaatacaggcgcaatctttaataatacaaat
gaagtgttaaaagcatatgcaaatggctttgtacatttacacacaagaattggtgtacat
gcaagttcattcaacaacccaacatttactgaagaacaaaacaaaaagattcttgctacg
tcagtaggtaaaattatattcaatgaaatcattccggattcatttgcttatattaatgaa
cctacgcaagaaaacttagaaagaaagacaccaaacagatacttcatcgatcctacaact
ttaggtgaaggtggattaaaagaatactttgaaaatgaagaattaattgaacctttcaac
aaaaaattcttaggtaatattattgcagaagtattcaacagatttagcatcactgataca
tcaatgatgttagaccgtatgaaagacttaggattcaaattctcatctaaagctggtatt
acagtaggtgttgctgatatcgtagtattacctgataagcaacaaatacttgatgagcat
gaaaaattagtcgacagaattacaaaacaattcaatcgtggtttaatcactgaagaagaa
agatataatgcagttgttgaaatttggacagatgcaaaagatcaaattcaaggtgaattg
atgcaatcacttgataaaactaacccaatcttcatgatgagtgattcaggtgcccgtggt
aacgcatctaactttacacagttagcaggtatgcgtggattgatggccgcaccatctggt
aagattatcgaattaccaatcacatcttcattccgtgaaggtttaacagtacttgaatac
ttcatctcaactcacggtgcgcgtaaaggtcttgccgatacagcacttaagacagctgac
tcaggatatcttactcgtcgtcttgttgacgtggcacaagatgttattgttcgtgaagaa
gactgtggtacagatagaggtttattagtttctgatattaaagaaggtacagaaatgatt
gaaccatttatcgaacgtattgaaggtcgttattctaaagaaacaattcgtcatcctgaa
actgatgaagttatcattcgtcctgatgaattaattacacctgaaattgctaagaaaatt
acagatgctggtattgaacaaatgtatattcgctcagcatttacttgtaacgcaagacac
ggtgtttgtgaaaaatgttacggtaaaaaccttgctactggtgaaaaagttgaagttggt
gaagcagttggtacaattgcagcccaatctatcggtgaaccaggtacacagcttacaatg
cgtacattccatacaggtggggtagcaggtagcgatatcacacaaggtcttcctcgtatt
caagagattttcgaagcacgtaaccctaaaggtcaagcggtaattacggaaatcgaaggt
gtcgtagaagatattaaattagcaaaagatagacaacaagaaattgttgttaaaggtgct
aatgaaacaagatcatatcttgcttcaggtacttcaagaattattgtagaaatcggtcaa
ccagtacaacgtggtgaagtattaactgaaggttctattgaacctaagaattacttatct
gttgctggattaaacgcgactgaaagctacttattaaaagaagtacaaaaagtttaccgt
atgcaaggggtagaaatcgacgataaacacgttgaggttatggttcgacaaatgttacgt
aaagttagaattatcgaagcaggtgatacgaagttattaccaggttcattagttgatatt
cacaactttacagatgcaaatagagaagcatttaaacaccgcaagcgccctgcaacagct
aaaccagtattacttggtattactaaagcatcacttgaaacagaaagtttcttatctgca
gcatcattccaagaaacaacaagagttctaacagatgcagcaattaaaggtaagcgtgat
gacttattaggtcttaaagaaaacgtaattatcggtaagctaattccagctggtactggt
atgagacgttatagcgacgtaaaatacgaaaaaacagctaaaccagttgcagaagttgaa
tctcaaactgaagtaacggaataa
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integrated database retrieval system
