Salmo salar (Atlantic salmon): 100380810
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Entry
100380810 CDS
T04363
Symbol
top3b
Name
(RefSeq) topoisomerase (DNA) III beta
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03440
Homologous recombination
sasa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100380810 (top3b)
03460 Fanconi anemia pathway
100380810 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sasa03032
]
100380810 (top3b)
03400 DNA repair and recombination proteins [BR:
sasa03400
]
100380810 (top3b)
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100380810 (top3b)
DNA replication proteins [BR:
sasa03032
]
Eukaryotic type
DNA Topoisomerases
100380810 (top3b)
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
100380810 (top3b)
FA (Fanconi anemia) pathway
100380810 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
100380810
NCBI-ProteinID:
NP_001167403
UniProt:
C0H9Z6
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All DBs
Position
ssa24:complement(40845402..40875900)
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AA seq
857 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSKGSCSSRKGLNGACSVHEYMGTFSGQSVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFTKAPTEKKEANPKLNMVKFLQVEGKGCDYVVLWLDCDK
EGENICFEVLDAIEPVMNRPYGSERTVYRAKFSSITDTDIWAAMNKLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVIQAKVFKGKESPLTLDWDRVRVFDREVGQMFVNMTKTSREAKVESVSKKEKAKQRPLA
LNTVEMLRVASSSLGMGPQHTMQIAERLYTQGYISYPRTETNHYHDNFDLKGTLRQQANN
PFWAQEVKALLSEGLNRPRKGADAGDHPPITPMRAASEGELGSDGWRLYEYIVRHFIATV
SQDCKYLQTTISFTIASEGFSCSGKTLISPGFTEVMPWLGIPLEEAMPVCERGDVFTVEE
IKLVERQTCPPDYLTEADLITLMEKHGIGTDASIPVHINNISQRNYVTVENGRKLKPTNL
GIVLVHGYYKTDAELVLPTIRGAVEKQLNLIAQGKANYQQVLQHTLDIFKRKFHYFFDTI
ASMDELMEVTFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCAGCDETYSLPQNGAIKL
YKELRCPLDEFELVLWTSGSRGKSYPLCPYCFSNPPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECEGGVLVLDPTSGPKWKMACNRCNVMVHFFEHAHRVQVAQESCEACEASLVA
VDFNKTRSPLPDGEMQHSGCVFCDPVFQDLVELKHATMRHPSMTRGGGARRGGRGRGRGR
REKKPKDKMAALAAYFV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagttttgatggtagcggagaagccgtcgttggctcagtcaattgccaaaatc
ctatctaaaggcagctgctccagtcgtaaaggtctgaacggagcatgttcggtccacgag
tacatgggcaccttctcaggccagagcgtgcgctttaagatgacgtcggtgtgtgggcac
gtgatgagtctggatttcatagggaagtataataactgggacaaggtggatccagctgaa
ctcttcactaaagcccctactgagaagaaggaggccaaccccaaactcaacatggtcaag
ttcctacaggttgaaggcaagggatgtgactacgtggttttgtggttggactgcgacaaa
gagggagagaacatctgctttgaggtcctggacgccattgagccggtgatgaaccgtccg
tacggcagtgaacggaccgtctaccgagccaagttcagctccatcaccgacacggacatc
tgggcggccatgaacaagctgggagagcccaaccgtaacgaggctctgtccgtagacgcc
cggcaggagctggacctgcgcattggctgtgccttcacccggttccagaccaagtacttc
cagggtaaatacggtaacctggactcatccctgatctcctttgggccatgtcagacccct
acactgggcttctgtgtggagcgccacgacaagatccagtccttcaaaccagagacctac
tgggtcatacaggctaaggttttcaaagggaaagagtctcctctgactctggactgggac
agggtgagggtcttcgacagagaggtgggacagatgtttgtcaacatgactaagacctcc
agggaggccaaggtggagtcggtgagtaagaaggagaaggccaagcagagacctctggcc
ttgaacaccgtggagatgctccgagtggccagctcctctctaggtatgggtccacagcac
accatgcagatagcagagcgtctgtacacccagggttatatcagctaccctcgtactgag
accaaccactaccacgacaactttgacctgaaggggacactcagacagcaggctaacaac
ccattctgggctcaggaggtgaaggctctgctgtcagagggactgaaccgtcccaggaaa
ggagctgacgcaggagatcaccctcccatcacccccatgagggctgcctccgaaggagag
ctaggaagtgacgggtggcgtctgtatgagtacatcgtgcgtcacttcatcgccacggtg
agtcaggactgtaagtacctgcagacaaccatctccttcaccatcgcctccgagggtttc
tcctgcagtgggaagacactcatatcacctggctttacggaggtgatgccgtggctgggt
atccctctagaggaggccatgccagtgtgtgagaggggagatgtcttcacagtggaggag
attaaactagtggagagacagacctgccctccagactaccttactgaggccgacctcatc
acactgatggagaaacacggcataggtactgacgccagcatcccggtccatatcaacaac
atctctcagaggaattatgtgacggtggagaacggacgcaagctcaaacccaccaacctg
ggcatcgtcctggtgcatggatattacaagacagatgctgagctggtgctgcctaccatc
cgaggtgcagtagagaaacagctcaacctgattgctcagggcaaggccaactaccaacag
gttctgcaacacacactggacatcttcaagaggaagttccactacttctttgacaccatc
gctagtatggacgagctcatggaggtgacgttctctcccatcgctgccaccggcaagccc
ctgtctcgctgcggcaagtgccatcgcttcatgaagtacattcaggccaagcccagccga
ctgcactgtgctgggtgtgatgagacgtacagcctgcctcagaatggcgccatcaagctg
tacaaggagctgcgctgcccactggatgagtttgagctggtgctgtggacctctggatcc
aggggaaagagctaccccctttgtccctactgcttcagcaacccccccttcagggacatg
aagaaaggtatgggatgtaatgagtgcacccacccgtcctgccaacacagtctcaactcc
ctgggtattggtcagtgtgtggagtgtgagggcggggtgctggttttggaccctacctcc
ggccccaagtggaagatggcctgcaacaggtgcaatgtgatggtgcacttctttgagcac
gcacacagggtgcaggtagcccaggagagctgtgaggcatgtgaagcgtccctggtagcg
gtggacttcaacaagacgcgctccccgctccctgacggagagatgcagcacagcggctgt
gtgttttgcgacccagtcttccaggacctggttgaactcaaacacgccaccatgagacac
ccctccatgacccgcggtgggggtgcacggcgaggggggcggggcaggggcagagggcgc
agggaaaagaaacccaaagataagatggctgccttggcagcgtacttcgtgtag
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