Salmo salar (Atlantic salmon): 106561447
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Entry
106561447 CDS
T04363
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
106561447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sasa04040
]
106561447
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106561447
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF2894
Motif
Other DBs
NCBI-GeneID:
106561447
NCBI-ProteinID:
XP_013980887
UniProt:
A0A1S3KRD9
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Position
ssa10:98616625..98650979
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AA seq
842 aa
AA seq
DB search
MPKQQQQNRDLELDRLVRQVPLHHRSPTRTPSPSSPNSTLELPNVPSYPRLPPISLSRQL
SGLFNPTFHIEDDPTSALPSVSSRLSVHPAVNVEDVDSGGGEHHRHHIPQILTLQDPNFK
TLTVPGVSKTSRQSKVAEKEKKLYSQSEEDEEEMEIAVRAWPSQSSILSGDDGLKERPAS
SASQASYVVNERLQELVKMFKERTERAKEKLIDPDHSDDDSPTASPARAPTPPPAPPEEL
KEEEMEEQQPKPRLCCKVTPPRWIRALLHYRFPASIDPFTNLVYVLWLFFVTLAWNWNMW
LIPVRWAFPYQTPSNIYLWLLTDYLCDLIYILDILVFQPRLQFVRSGDIVFDKKDMRVNY
MKTFRFKMDVISLVPLELFYFKTGINPLLRFPRLLKIMSFFEFNDRLEGILTKAYVYRVI
RTTTYLLYCLHCNACLYYWGSAYEGLGSTQWVYDGQGNSYIRCYYFAVKTLITIGGLPDP
TTLFEIIFQLINYFVGVFAFSIMIGQMRDVVGAATAGQTYYRACMDNTVKYMASYRIPKD
VQNRVKTWYNYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNYDIVSKVSLFQGCDRQMIF
DMLKRLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKTVFVTLRAGSVFGEIS
LLAVGGGNRRTANVVAHGFANLFILDKKDLNEILVHYPESQKLLRKKARKMLTKDKKPPK
EPAQVIPPRTVTPKLFKAALDVAHQKTGLKGTLAKIKEKINKSSVSLQPSMSSSLPPLSP
VSPVFSLDPEREANAMSPTLDSSTLLCPVSHCHGDETLSKEQGQVEGEVAGESGKKKEKR
KA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagcagcagcagcaaaaccgggacctggagttggaccgcctggtccgccaggtc
cctctccaccaccgctctccgactcgcaccccctcaccgtcctcccccaacagtacccta
gagctgcccaacgtgccctcctacccccgcctgccacccatcagcctgtccaggcagctg
tcagggcttttcaaccccaccttccacatcgaggacgaccccacgtccgctctaccctca
gtgagctccaggctcagtgtgcacccagctgtcaatgtggaggatgtggattcaggcgga
ggggagcaccaccgccaccacattccccaaatccttaccctacaggaccccaacttcaag
accctgaccgtacccggagtgtccaaaaccagccgtcagagtaaagttgctgaaaaagaa
aagaagttgtactctcagagtgaggaggatgaagaggagatggagattgcagtgagggca
tggcctagccagtccagcatcctcagtggagatgatgggctaaaggagcgccctgcgtcg
tccgctagccaggccagctacgtggtgaacgagcgcctacaggagctggtcaagatgttt
aaggagaggacagaaagggccaaagagaaactcatagacccagatcactctgatgatgac
agtcccactgcctcccctgcgagagctccaacacctcctcctgctcctccagaggagctg
aaggaggaggagatggaggagcagcaacccaagcctagattatgctgcaaggtgacgcct
cctcgctggatcagagctctgctgcactaccgctttcccgcaagtatcgaccccttcacc
aatctggtctatgtgctgtggctgtttttcgtcaccttggcgtggaactggaacatgtgg
cttatcccggtgcgctgggccttcccctaccagacccccagtaacatctacctgtggcta
ctcactgactatctgtgtgacctcatctacatcctggacatcctggtcttccagccccgc
ctgcagtttgtccgcagtggagacatagtgtttgacaaaaaggacatgagagtgaattac
atgaaaacctttcgtttcaagatggatgtcatcagtcttgttccactggagttgttctat
tttaaaactgggatcaacccactcctccgcttcccacgactactaaagataatgtctttc
ttcgagttcaacgaccgtcttgagggcatcctgaccaaagcctacgtttacagagtgatc
cggaccaccacctacctgctgtactgcctgcactgtaatgcctgtctgtactactggggc
tctgcgtatgaaggtctgggctccacgcagtgggtctatgatggacagggcaacagttac
atccgctgctactactttgctgtgaagaccctaatcaccattggtggactgccagacccc
acaacgctctttgaaatcatctttcagctcatcaactactttgttggagtgtttgccttt
tccatcatgattggacagatgagagacgtggttggtgcagccacagcaggacagacgtac
tacagagcatgcatggacaacactgtcaaatacatggcctcctaccgtatccctaaagat
gtgcagaaccgggttaaaacctggtacaactacacctggcagtcccagggcatgctggat
gaacaggagcttctggtccagctcccagacaagatgaggctggacatcgctgtggatgtc
aactatgacattgtcagtaaagtgtctctcttccagggttgtgatagacagatgattttt
gacatgctgaagagactgaggtctgttgtttacctcccaggggactatgtctgcaaaaag
ggtgaagttggacgggaaatgtacatcatcaaagccggagaggtgcaggtggtgggcggg
ccagacgggaagactgtgtttgtcacgctgagggcggggtcagtgtttggggaaatcagc
ttgctggcagtgggtggagggaacaggagaacagcaaacgtggtggctcatggcttcgcc
aacctgttcatcctggacaagaaggacctcaatgagattctagtgcattaccccgagtcc
cagaagctgctccgcaagaaggccaggaagatgctcacgaaagataagaagcctccgaag
gagccggcccaggtgatccctcctcgaacggtcacgcccaagctattcaaagctgctctg
gatgtggcgcatcagaaaacaggcctcaaagggaccctcgccaagattaaggagaagatc
aacaaatccagcgtttctctacagccctccatgtcctcctccctgcctcccttgtcccca
gtctctccagtcttcagtctggacccagagcgcgaggctaacgccatgtcaccaacctta
gacagctctacgctgctctgccccgtctcccattgtcacggagatgagacactctccaag
gagcagggccaagtggagggagaagttgcaggagagagtggaaagaagaaagaaaagaga
aaggcatga
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