Salmo salar (Atlantic salmon): 106562928
Help
Entry
106562928 CDS
T04363
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04137
Mitophagy - animal
sasa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106562928
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
106562928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106562928
03009 Ribosome biogenesis [BR:
sasa03009
]
106562928
04131 Membrane trafficking [BR:
sasa04131
]
106562928
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106562928
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106562928
Ribosome biogenesis [BR:
sasa03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
106562928
Membrane trafficking [BR:
sasa04131
]
SNARE
SNARE associated proteins
Others
106562928
Autophagy
Aggrephagy
Other aggrephagy associated proteins
106562928
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106562928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
RNA_helicase
AAA_28
Vps4_C
nSTAND3
AAA_18
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_7
ATPase
DUF815
Bac_DnaA
ABC_tran
AAA_24
NB-ARC
ResIII
TsaE
Zeta_toxin
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
bpMoxR
UFD1
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
106562928
NCBI-ProteinID:
XP_013983510
UniProt:
A0A1S3KY43
LinkDB
All DBs
Position
ssa11:50312374..50365154
Genome browser
AA seq
867 aa
AA seq
DB search
MASGGDSKVGLRKDQNAPYGTAGTVKQHQQAQTPGRVAAALVTLILTILQYKGRNSNTFG
TDYEGDMRSKNDLSTAILKQKTRPNRLVVDESLNEDNSVVSLSQAKMDELQLFRGDTVLM
KGKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPI
DDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPD
TVIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPR
GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA
IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRR
FGRFDREVDIGIPDATGRLEILQIHTKNMKLSDDVDLEQVANQTHGHVGADLAALCSEAA
LQAIRKKMDLIDLEDETIDAEVMSSLAVTMDDFRWALSQSNPSALRETVVEVPNISWEDI
GGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANF
ISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADR
VINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILSA
NLRKSPIAKDVDLDFLAKMTNGFSGADLTEICQRACKMAIRESIENEIRRERERQTNPLA
MEVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTSSAP
GAGPSQGSAGGSRGTVFNEDNDDDLYG
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggaggagacagtaaagttggattaagaaaagatcaaaatgcaccttatgga
acagcggggactgtgaagcaacaccaacaggcacaaaccccaggaagagtagctgctgcc
ctggtcaccctaattctgaccatcctacagtacaagggtagaaactccaatacattcgga
acggattatgagggagacatgagatcgaaaaatgatctatccacagcgattttaaagcag
aagacaaggcccaaccggttggttgtggatgaatctctcaatgaggacaacagtgtggtt
tctctgtctcaggcaaagatggatgagttgcagctgttcaggggagacacagtgctgatg
aaaggaaagaagagacgggagacggtatgcatcgtgctctctgacgacacctgctccgac
gagaaggtccgcatgaacagagtggtccgcaacaacctgagagtccgcctgggagatgtc
atcagtattcagccatgcccggatgtgaagtacgggaagcggatccatgttctgcccatc
gatgacactgtagaggggatcacagggaacctgtttgaggtctacctcaagccctacttc
ctggaggcctacaggcccatcaggaaaggggacattttcctggtgaggggaggcatgcgt
gcggtggagttcaaggtagtggagacggatcccaacccctactgcatcgtggccccagat
actgtcatccactgtgagggcgagcccatcaaacgagaggatgaggaggagtctctgaat
gaggttggctatgatgacattgggggtgtgaggaagcagctggcccagattaaggagatg
gtggagctgcccctgagacacccagcactattcaaggccatcggcgtcaagcctccaagg
ggtatcctgctgtatggaccccctggaacaggaaagacgctgattgcacgtgccgtggcc
aatgagactggagccttctttttccttatcaatgggcctgagatcatgagtaaactggct
ggagagtctgagagtaacctgaggaaggcctttgaggaggctgagaagaatgcccccgcc
atcatcttcattgacgagctggacgccattgcaccaaaaagagaaaagacacacggtgag
gtggagaggcgcattgtgtcccagctcctcacactcatggatggcctaaagcagcgcgct
cacgtcatcgtcatggcagccaccaacaggcccaacagcattgaccccgccctgaggcga
tttgggcgttttgacagggaggtggacatcggcatccctgacgccacaggcagactggag
atcctccagatacacaccaagaacatgaaactgtccgacgacgtggacctcgagcaggtt
gccaatcagactcacggccatgtgggtgctgacctggccgctctgtgctctgaagccgcc
ctgcaggccatcaggaagaagatggatctcatcgacctggaggacgaaaccatcgacgca
gaggtcatgagctccctggctgtcaccatggacgacttcagatgggctctaagccagagc
aacccgtcagccctgagagagacggtggttgaggtgcccaacatcagctgggaggacatc
ggaggtctggaggacgtcaagagggaactccaggagcttgtacagtacccagtggagcac
ccagacaagttcttgaagttcggcatgactccgtccaagggtgtgctattctacgggccc
ccaggttgtggtaagaccctgctggccaaagctatcgccaacgagtgccaggcgaacttc
atctccatcaaaggacctgagctgctcaccatgtggttcggagagtccgaggccaacgtt
cgtgagatcttcgacaaggctcgccaggccgccccctgcgtgcttttctttgacgagctg
gactccatcgccaaggcacgtggcggcaacgtgggtgatggtggcggagctgccgaccgt
gtcatcaaccagatcctgacagaaatggacggcatgtccagcaagaagaacgtcttcatc
atcggcgccaccaacaggcctgatatcatcgacccggccatcctgaggcccggaagactg
gaccagctcatctacatccctctgccagacgagaagtcccgcatcaacatcctcagcgcc
aacctcaggaagtcacccatcgccaaggatgtggacttggatttcctggccaagatgacc
aatggtttctctggtgctgacctgacagagatctgtcagagggcctgtaagatggccatc
agggagtccattgagaatgagatcaggagggagagagagcggcagaccaaccccttagcc
atggaggttgaggaggacgaccctgtcccagagatccgtaaagaccattttgaggaggcc
atgcgtttcgcccgccgctcagtcagcgacaacgacatccgcaaatacgagatgttcgcc
cagacgttacagcagagcagaggcttcggcagcttccggttccccactagctctgcgcca
ggcgctgggcccagccagggctctgctggtggcagcaggggtacagtcttcaacgaggac
aacgacgacgacctctatggttaa
DBGET
integrated database retrieval system
