Salmo salar (Atlantic salmon): 106563622
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Entry
106563622 CDS
T04363
Symbol
hpse
Name
(RefSeq) heparanase
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa00531
Glycosaminoglycan degradation
sasa01100
Metabolic pathways
Module
sasa_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
106563622 (hpse)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sasa00536
]
106563622 (hpse)
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
106563622 (hpse)
Glycosaminoglycan binding proteins [BR:
sasa00536
]
Heparan sulfate / Heparin
Enzymes
106563622 (hpse)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Cu2_monooxygen
Motif
Other DBs
NCBI-GeneID:
106563622
NCBI-ProteinID:
XP_013984841
UniProt:
A0A1S3L1K1
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Position
ssa01:complement(117995923..118003095)
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AA seq
545 aa
AA seq
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MSGISILAFVMISMLSYGYYVVASVEPARYEWDFESVNLNVDLSRILKKVNGRFLSVAID
ASLVAEEKFMYLLTSPKLRTLAKALSPAFLRFGGTRQDFMTFNPTFLHSNENHKNSVFDA
DDICERLELPPLLEKRLKQEWTLQEVLLDKEDLQRKYRSVKFTECAVDLLYSFTNCSGLD
LIFGLNELLRTSGNSWDSSNARTLLQYCESKQYSMSWELGNEPNSYEKKAGIRVDGYQLG
QDFVQLRKILQESKLYNNTGLYGPDISQPRDHRKDLLEGFLESGAEAIDACTWHHYYVNG
RDTSLEDFLDPEVLNTLALKTQEVMETIELTSPGKKVWLGETSSAYGGGAKGLSDTFVAG
FMWLDKLGLGAKLGLDVLIRQVLIGSGTYHLVDENLDPLPDYWLSVLYKRLVGPEVLSIE
AFSILGKTKRVRVYLHCTNKKSTSYKSGAVTLFALNLSKGPARISVPVTISNSTAEAFVL
QSEQPGEEGLYSKSVKLNGEVLKMVDERTLPSLQGTPLPAGEYLRLPGYSFAFYVLSEAQ
ALACR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcatatcaatcttagcatttgtgatgatatctatgctatcgtatggatattat
gtcgtagcaagtgtcgagcctgcgaggtatgagtgggattttgagtccgtaaatctgaat
gtggacctctctcgaatactcaagaaagtgaatggccgttttttgtctgttgccatagac
gcgagtctagtcgctgaagagaagttcatgtaccttttaacgtctccaaagctgaggaca
ttggcaaaagctttgagcccagcatttctgagatttggagggacaagacaagatttcatg
accttcaacccaacatttttacattcaaacgagaatcacaagaactctgtgtttgatgca
gatgacatatgtgaaaggctggagctgcctccactactggaaaagaggctgaagcaggaa
tggactctacaggaagtacttctcgacaaggaggacttgcagaggaagtataggagtgtg
aagttcacagagtgtgcagtggatctgctctactcttttacaaactgctctggattagac
ctcatctttgggctcaacgagctgctcaggacctctgggaactcctgggacagcagcaat
gccaggaccctcctacagtactgtgaatctaaacagtacagcatgtcctgggagctgggc
aatgagcccaacagctatgagaagaaggcagggatcagggtggatggataccagctcggc
caagattttgttcaactccgcaagattctgcaggaatccaaactttacaataacactgga
ctctatggaccagacattagccagccccgggaccaccggaaagacttactggaggggttc
ttggagagtggggcagaagcaattgatgcatgcacctggcaccattattatgtcaatgga
agagacacgtctctagaagatttcctagaccctgaggtgctaaacacgttggccttaaaa
acacaggaagtcatggagaccattgagctgacctctcctgggaagaaggtgtggcttgga
gagactagttctgcctatggaggcggggctaagggcctgtctgacacgtttgtcgctgga
ttcatgtggctggataaactgggactgggtgcgaagcttggattggatgttctcatcaga
caggttttgattggatctgggacttaccacctggtagatgagaacctggatccacttcct
gattactggctatcagttctgtacaagaggcttgttggaccagaggtgctgagtatagaa
gccttttccattttgggaaagacgaaaagagtacgggtctacctgcactgcactaacaag
aaaagcacaagctacaaaagtggagcagtcacattgtttgctctgaacctgagtaagggc
cctgcgaggatctctgtgcctgttacaatctctaacagtaccgccgaggccttcgttcta
cagtctgaacagcctggcgaggagggactctactccaagtctgtgaaactcaacggagag
gtgttgaagatggtggatgaaagaacacttccatcgctccagggaactcctcttcctgca
ggagaatatctcagactccctggttattcctttgccttctatgtcctcagcgaggcccag
gcgctggcctgccgatga
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