Salmo salar (Atlantic salmon): 106565674
Help
Entry
106565674 CDS
T04363
Name
(RefSeq) interferon regulatory factor 6-like
KO
K10154
interferon regulatory factor 6
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106565674
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106565674
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
106565674
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106565674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
106565674
NCBI-ProteinID:
XP_013988513
UniProt:
A0A1S3LC27
LinkDB
All DBs
Position
ssa12:59247924..59255854
Genome browser
AA seq
516 aa
AA seq
DB search
MLLKFTVRASEGWQLSINKSQRFIITKTVSMAVTPRRVRLKPWLVAQVDSGLYPGLVWID
RDNKRFRVPWKHATRHTPQHEEENTIFKAWAVETGKFQEGIDDPDPAKWKAQLRCALNKS
REFNLVYDGTKEVPMNPLKIYDVCDIPQPLSNPGSSDSGSWTPNDCDEDEPDTPEPLPPY
PTSNGTSPTLMWSPPGSVSPLHPPSCPPSVEVWPKEEIKPWPKEEPLDVEMQPSHEEMAP
PPPLDMPSLPMSDMMFASPEMWISSLPMTDLEVQFQYRGKEVCPAMTVSNPQGCRLFYGD
LGPMVNQEELFGPISLEQLRFPSTEHIANDKQRVFTNRLLDVMDRGLILEVSGHDIYAVR
LCQCKVYWSGPCAPNPNAPNLIERQRKVKLFCLESFLSGVIAHQRGQSAILPQFDINLCF
GEEWPDSRPRERKLIMVQIIPVVARMITEMFSGDCMRSFDSGSVRLQISIPDIKDNIVTH
LKQLYRLLQTHQGQEGWPQALPPGAGMSLPQALHAQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgttgctcaaatttacagtaagggcgagcgaggggtggcaactaagcatcaacaaaagt
caaaggtttatcataacaaaaactgtaagcatggcggtgaccccgcggcgtgttcggctc
aagccctggctagtggcccaggtggacagtgggctctacccaggtctggtgtggatcgat
cgggacaacaagcgcttcagggtcccctggaaacacgctacgcgccacaccccccagcat
gaggaagagaacaccatctttaaggcctgggcagtggagacaggaaagttccaggagggt
attgatgaccctgaccctgccaagtggaaagcccagctccgctgtgccctcaacaagagc
agagagttcaaccttgtctacgatggcaccaaagaagtccccatgaaccccctgaagatc
tacgatgtctgtgacatcccacagcccctcagtaacccaggatcctcagactctgggtcc
tggacgccgaatgactgtgatgaagatgaaccagatactccagagccccttcctccttat
ccaacatccaacggcaccagccccactctaatgtggtctcctccggggtcagtatcgccc
ctccacccccccagctgccccccatcagttgaagtgtggcccaaagaggagattaagccg
tggccaaaagaggagcctttggatgtggagatgcagccctcccatgaggagatggcgccc
cctcctccacttgacatgccttcccttcccatgtctgacatgatgtttgcctccccagag
atgtggatcagctccttgcccatgacagacctggaggtgcagttccagtatcggggtaag
gaggtgtgtccagccatgactgtcagtaatccccagggctgcaggctgttttacggggac
ctgggccccatggtcaaccaggaggagctgtttggccctatcagcctggagcagctgagg
ttcccctctaccgagcacatcgccaacgacaagcagagggtcttcaccaaccgcctgctg
gacgtcatggaccgaggcctcatcctggaggtcagcggccatgacatctatgccgtccgc
ctctgccagtgcaaggtgtactggtcaggcccctgtgcacccaaccccaatgcacccaac
ctcatagagaggcagaggaaggttaagctgttctgtctggagtcgtttctcagtggtgta
atagcccatcagaggggccagtcggccattcttcctcagttcgacatcaacctgtgcttt
ggagaggagtggcctgacagcagacccagagagaggaagctcatcatggtgcagatcatc
cctgtggtagcacgtatgatcactgagatgttctcaggtgactgcatgcgctccttcgac
agcggcagcgtgcgcctgcagatctccatcccggacatcaaggacaacatcgttacccac
ctgaagcagctgtaccgcctgctgcagacccaccagggccaggagggctggcctcaggct
ctgccccctggggctggcatgagcctgccccaggccctgcatgcccagtga
DBGET
integrated database retrieval system
