Salmo salar (Atlantic salmon): 106566553
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Entry
106566553 CDS
T04363
Symbol
dhx35
Name
(RefSeq) DEAH-box helicase 35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106566553 (dhx35)
Enzymes [BR:
sasa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
106566553 (dhx35)
Spliceosome [BR:
sasa03041
]
Complex C
Other components
Complex C specific factors
106566553 (dhx35)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
nSTAND3
AAA_7
AAA_30
PG_binding_1
ATPase
AAA_23
Motif
Other DBs
NCBI-GeneID:
106566553
NCBI-ProteinID:
XP_013990137
UniProt:
A0A1S3LGR5
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Position
ssa13:13539021..13556540
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AA seq
706 aa
AA seq
DB search
MCDVEAKMAAPLSTMKFWKPGSEAPGISEERHVTTETTGSPIIFNPHTALSIEKQRQKLP
VFKHRNNILYLVESYQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAIS
VANRLAEERGALLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLML
DEAHERTLYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFQEFFNLNETGDPNKDTCGI
LTVEGRTFPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQ
EQARALGRLGMKKYLKVLPMYAGLPYTDQMKVFERTPPTVRKVVVATNIAETSITINGIV
FVIDCAFVKLRAYNPCTAIESLVVTPISKASASQRAGRGGRNRAGKCFRLYTEEDFEKLP
ASTVPEMQRTNLAPVILQLKALGIDNVLRFSFLSPPPAQSMVQALELLYALGGLDQYGRL
TDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFMVPANQKKPAAREH
RKFAVAEGDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLQRAMTVREQLRRLMNKFKVP
RTSSEGDPDVILRCIVSGFFANAARMHHSGSYRTLRDDRELHIHPNSVLFGEKPTKWVVF
NEVVQTSKYYMRDVTAVESSWLVELAPHFYKQAKHGSLTSKRSRVL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgtagaagccaagatggcggcccccctctccacgatgaaattttggaaaccg
ggttcggaggcccctgggatatcggaggagcggcatgtcacgacagaaacgacaggctcc
cccataattttcaaccctcacaccgcgttgtccatcgagaagcagcgacagaaacttcct
gttttcaagcacagaaacaacatcctctacttggtggagagttaccagacagtgatcatc
gtaggagagacaggatgtgggaagactacacagatcccccagtatttgctggaggctggc
tgggcagctgaggggaaggtgattggtgtgacacagcctcgtagagtggctgctatctca
gtagccaatcgtttggcagaagagcgtggagccctgttggggcatgaggtgggctatacc
attcgctttgatgactgctctgacccccatgccacccgcattaagttcctgacagatggg
atgctggtgagagagatgatggctgatcctctactgaagaagtacagtgtcctaatgctc
gacgaggcccatgaaagaaccctctacacggacatagccatcggcctgctaaagaagatt
cagaagaagcgcagagacctcaggctgatagtggcctctgccactctggatgccaagaaa
ttccaagagttctttaacctgaatgagactggagatcctaacaaggatacgtgtggaatt
ctgacggtggaggggcgcaccttccctgttgacgtcttctacactgtcagcccagtccca
gactatgtgaaggccacagtggagacggtgctgaagatccatgagactgaggatgatgga
gatgttctggcattcctcactggacaggaggaagtggagaaggtggtgtctctgctccag
gagcaggccagagctctgggccgtctcggcatgaagaaatacctcaaggtgctgcccatg
tatgcaggcctgccctacactgaccagatgaaggtgtttgagaggacgccccctactgtc
cgcaaggtggtggtggccactaacatagcagagacgtccatcaccattaacggcatcgtg
tttgtgatcgactgtgcgttcgtcaagctgcgggcgtacaatccttgcactgccatcgag
tcgctggtggtcacgcccatctccaaggcctcagccagtcagagggcaggacgaggggga
cgcaaccgagcagggaagtgcttcagactatacacagaggaggattttgagaagctgcct
gcatccacggttcccgagatgcagcgtaccaacctggcccctgtcatcctgcagctcaaa
gctctgggcatagacaacgtgctgcgattcagcttcctctctcctcctccagcccagtcc
atggtccaagccctggagctgctctacgccctggggggtctggaccagtatggtcgtctg
actgaccctatgggcgtgcgtatggcagagttccccctcagccccatgtttgccaagatg
ctgctggagtcaggaaactttggctgttccaaggagatcgttaccatagcagccatgatg
cagatccaaaacatcttcatggtgccagccaatcagaagaaaccagcggcgcgtgagcat
cgcaagtttgctgtggcggaaggagatcatctcaccatgctcaatgtgtacgaagccttc
atcaagcaccagaagagctctcagtggtgtcaggaacacttcctcaactacaagggtctg
cagcgagccatgactgtacgagaacagctcagacgactcatgaataaattcaaggtgcca
cgcacctccagcgaaggtgacccggatgtgatcctgagatgcattgtgtctgggtttttt
gccaacgctgcccgcatgcaccactcagggtcctacaggactctacgggatgacagagag
cttcacatccatcccaactctgtgctgtttggagagaagcctacgaagtgggttgtcttc
aatgaagtcgtgcagacctctaagtactacatgcgtgatgtcacagctgtagagtcctcc
tggttggtcgagcttgctccccacttttacaagcaggctaagcatgggtcattaaccagc
aagagatccagggtcctctga
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