Salmo salar (Atlantic salmon): 106570201
Help
Entry
106570201 CDS
T04363
Name
(RefSeq) thrombospondin-3b-like
KO
K04659
thrombospondin 2/3/4/5
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04145
Phagosome
sasa04510
Focal adhesion
sasa04512
ECM-receptor interaction
sasa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106570201
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
106570201
09144 Cellular community - eukaryotes
04510 Focal adhesion
106570201
09142 Cell motility
04820 Cytoskeleton in muscle cells
106570201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sasa04131
]
106570201
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sasa04147
]
106570201
00536 Glycosaminoglycan binding proteins [BR:
sasa00536
]
106570201
Membrane trafficking [BR:
sasa04131
]
Endocytosis
Phagocytosis
Opsonins
106570201
Exosome [BR:
sasa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
106570201
Exosomal proteins of colorectal cancer cells
106570201
Exosomal proteins of bladder cancer cells
106570201
Glycosaminoglycan binding proteins [BR:
sasa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106570201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
cEGF
EGF_3
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
106570201
NCBI-ProteinID:
XP_013997754
UniProt:
A0A1S3M489
LinkDB
All DBs
Position
ssa14:63478231..63516468
Genome browser
AA seq
955 aa
AA seq
DB search
MDMVRFVLSLLLASAAVLLSLTRASEMQVIDMLELHDARQIASAVGKMSGALGFVSDFYL
VSTVRLPPKLGGVLLGVYNKGDNRKYLEVALMGKINKVLVRYVRENGKLHTVNLQNPGLS
DGRIQSLILHVGGLQQNHLHMELYVNCRLADSAQVLPSMVQLPAEAESVEIRNGQKAYAR
LQGSVDSLKLALGGSIAKAGILTDCPFQGDTHFQNSVSADVNAILGDHTKALIGQLIIFN
QILGELREDIREQVKEMSLIRNTILECQVCGFYETHSRCKPNPCYKGLACTETWEYPGYR
CGACPDGMTGNGTHCQDIDECALAQPCFSPEGCVNMAKGFTCEPCPVGFSGPLLSGLGVE
FAKSHKQKCIDVDECADLSKSCVPNSVCINTEGSFRCGPCKESFVGNQTVGCFLRRSCAT
LGFNPCDVNAHCVIKGAASVSCECNVGWAGNGHTCGPDTDIDGYPDQPLPCIDNNYHCRA
DNCVNTPNSGQEDADGDGIGDQCDEDADGDGIRNVEDNCCLVPNKDQQNSDTDSYGDTCD
NCPNVPNGSQKDTDGNGAGDTCDNDIDGDGIPNVLDNCPKVPNPMQTDRDGDRVGDACDS
CPEVNDPMQSDIDNDLVGDVCDNNQDMDGDGHQDSRDNCPDVPNSSQLDSDNDGIGNECD
DDDDNDGIPDARPPGPDNCRLIPNPSQTDTDGNGVGDMCENDFDNDSVIDLIDVCPESAE
VTMTDFRNYQTVILNPEDDAQIEPKWIVLNRGMEIVQTMNSDPGLAIGYTAFNGVDFEGT
FHINTATDDDYVGFIFGYQDSSSFYVVMWKQTEQTYWQSLPFRAMAQPGLQLKAVKSHTG
PGEYLRNALWHTGDTPGEVTLLWKDPRNVGWRDKTSYRWHLSHRPQVGYIKVRLYEGMTL
VADSGVLVDTSMRGGRLGVFCFSQEQIIWSNLGYRCNDTVPEDYEFYHKLIHIRV
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggatatggtgaggtttgtgctaagtttgctgcttgcgagcgcggctgttctcttgagc
ttgaccagggcttcagaaatgcaagtgattgacatgctggagctgcatgatgccaggcag
attgcgtccgcggtggggaagatgtcgggggctctgggcttcgtgtcggacttttacctg
gtgtcaactgttcgtctgccgcccaaactgggaggagtgctgttgggagtctacaacaaa
ggcgacaacaggaagtacctggaggtggccctcatgggcaagatcaacaaagttctggtg
cgctacgtacgcgagaatggtaaactccacacagtgaacctccagaaccccggcctctcc
gatggacgcatccagtcactcatcctccatgtgggtgggctccaacaaaaccacctccac
atggaactctatgtcaactgccgattggctgactcagcacaggtcctgccgtccatggtc
cagctcccagctgaggcagagtctgtggagatacgcaacgggcagaaggcctatgccagg
ctacagggctcagtggactctttgaaactggctttgggtggctccatagccaaagcagga
atccttaccgactgtccgtttcagggagatacacattttcagaattcagttagcgccgat
gtcaatgccattctgggtgaccacaccaaggctttgattggccagctgatcatcttcaac
cagattcttggcgaactccgagaggacatcagggaacaggtaaaggagatgtctctgatt
aggaacactatcctggagtgccaagtatgtggcttctacgagacccactcccgctgcaag
cccaacccctgctataagggcttggcctgtacagagacctgggagtacccagggtaccgt
tgtggtgcctgcccagatggcatgacagggaatggcacccactgccaggacattgacgag
tgtgctctagcccagccttgtttctcgcccgaggggtgcgtaaacatggcaaagggcttc
acctgtgaaccatgtcccgtcggcttctcaggacccctccttagcgggcttggggtggag
tttgccaagagccacaagcagaagtgcatagatgtggatgagtgtgctgacctctccaag
tcctgcgtgcccaactctgtctgcatcaacacagagggctcgttcaggtgtggtccgtgt
aaggagagcttcgtaggcaaccagacggtgggctgtttcctgcggaggtcctgcgccacg
ctgggcttcaacccctgtgacgtcaacgcccactgtgtcataaagggtgctgccagcgtc
tcctgcgagtgtaatgtgggctgggcaggtaatgggcatacatgtggtccagacacagac
atcgatggctaccccgaccagcctctcccctgcatagacaataactatcactgccgagcc
gacaactgtgtgaacacgcccaactctggccaggaggacgcagacggagacggtataggt
gaccagtgtgatgaagatgcggacggagacggcatcaggaacgtggaggacaactgctgc
ctggtccccaacaaggatcaacagaactcggacacagactcatatggggacacatgtgac
aactgccccaacgttcccaatggaagccagaaggacacagatggaaacggggctggggac
acctgtgacaatgacattgatggggatggtatcccaaacgtgctggacaactgtcccaag
gtgcccaaccctatgcagactgaccgggatggggatcgagtgggggacgcctgtgacagc
tgcccggaagtcaacgaccccatgcagtctgatatagacaacgacctggtgggagatgtg
tgtgacaacaaccaggacatggatggggacggccaccaggattcaagggacaactgtcca
gacgtccctaacagctcccagctggactcagacaatgacggcatcggcaacgaatgcgac
gatgacgacgacaacgatggcattccagatgcgagacctcccgggccggataactgtcgt
ctcatccctaaccccagccaaacagacactgatggaaatggcgttggtgacatgtgcgag
aatgactttgacaacgactccgtgatagacttgattgacgtgtgtccagagagcgctgaa
gtcacaatgaccgacttcagaaactatcagacggtcatcctgaacccggaggacgatgcc
caaatcgaacccaagtggattgtgctcaatcggggtatggaaattgttcaaaccatgaac
agtgaccctggtttggccataggctacacagcctttaacggggtagactttgaagggacg
ttccacatcaacacggccacagacgatgactacgtgggcttcattttcggttaccaggac
tcgtccagcttctacgtggtcatgtggaaacagacggagcaaacctactggcagtcgctg
ccttttagggccatggctcagccaggcctgcaactaaaggcagtgaagtcacatacgggt
ccaggcgagtacctccggaatgccctgtggcacacgggcgacaccccgggtgaggtcacc
ctgctgtggaaggacccccggaatgtggggtggagggacaagacatcctaccgctggcac
ctcagccaccgcccgcaggtgggctacatcaaagtgagactgtatgaaggcatgacattg
gtggcagactcgggcgtgctggtggatacctcaatgaggggcgggaggctgggcgtcttc
tgcttctcccaggagcaaatcatctggtccaacctgggctatcgctgcaacgatactgta
ccagaggactatgagttctaccacaagctgatccacatcagggtgtga
DBGET
integrated database retrieval system
