Salmo salar (Atlantic salmon): 106571090
Help
Entry
106571090 CDS
T04363
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106571090
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106571090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106571090
Spliceosome [BR:
sasa03041
]
Common components
Common spliceosomal components
SR proteins
106571090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
106571090
NCBI-ProteinID:
XP_013999233
UniProt:
A0A1S3M7M3
LinkDB
All DBs
Position
ssa15:18460779..18476325
Genome browser
AA seq
325 aa
AA seq
DB search
MSGCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGGGGGRFPDRYGRGSQDSRRTNQPSG
QPPDRNPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASY
SDLKNAVEKLSGKEINGRKIKLIEAAKKRGSRSRSRSESSSRSRSRNRSPSRSRTPRRSR
SHSPKRDYNRSRSRSHSGSPAPRGAAPGSPPPRAKETSSTSSKRPSKPSKSASPHSPPPA
QRAPSRSRSRSRSRGSRSPSTDSRH
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgccgcatatttgtcggccggttgaacccgtccgccagagagaaggacgtg
gagagattcttcaaaggatacggccgcatccgagacatcgacctgaagagaggctttggt
tttgtggagtttgatgatcccagggatgctgaggatgccgtttatgagctggacggcaag
gagctctgcaacgagagggtaaccattgagcacgcccgtgtgcgcctgcgtggtggccga
ggacgcggtggtgacagaggtggtggtggtggcggtggaggaggagggggtggaggccgc
ttccccgatcgctacggccgtggctcccaggatagtcggaggaccaaccaaccaagtgga
caaccgccagataggaaccctcctccgatgcgtacggagaaccgtctcatcgtggagaac
ctatcatctcgcgtcagctggcaggacctgaaagatttcatgagacaggcgggggaagta
acgttcgcagacgcccaccgccccaagctcaacgaaggggtggttgagttcgcttcttac
agcgatctgaaaaacgctgttgagaagctgtctggcaaggagatcaatggaaggaaaatc
aagctgattgaggcagctaagaagaggggttccaggagtcgttcccgctcagagagctcc
tctcgttcccgttctcgtaaccgttccccgtcccgctccaggacaccccgtcgttccagg
tcacactcccccaagagagactacaaccgctctcgttctcggtcccacagcggctcccca
gctccccgtggtgccgcccccggctccccaccgcccagggctaaggagacctcttccacc
tcctccaaacggccctccaagcccagcaagtctgcctcccctcactcccctccccctgca
cagcgtgcaccttccaggtctcggtctaggtctaggtctcgtggctctcgttccccgtcc
acagacagccgccactga
DBGET
integrated database retrieval system
