KEGG   Salmo salar (Atlantic salmon): 106573122Help
Entry
106573122         CDS       T04363                                 

Gene name
DHSA
Definition
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial-like
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa00020  Citrate cycle (TCA cycle)
sasa00190  Oxidative phosphorylation
sasa01100  Metabolic pathways
sasa01200  Carbon metabolism
Module
sasa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sasa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sasa_M00148  Succinate dehydrogenase (ubiquinone)
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    106573122 (DHSA)
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    106573122 (DHSA)
Enzymes [BR:sasa01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     106573122 (DHSA)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 Thi4 GIDA FAD_binding_3
Motif
Other DBs
NCBI-GeneID: 106573122
NCBI-ProteinID: XP_014003314
UniProt: B5X0X6
LinkDB All DBs
Position
ssa02
AA seq 659 aa AA seqDB search
MASVSRVLTKRFLLAKALPAAARCSSRNIHFSIYGKKDNAKVSDDISTQYPVVDHEFDAV
VVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEGDDWRWHFYD
TVKGSDWLGDQDAIHYMTEQAPAAVVELENFGMPFSRTEDGKIYQRAFGGQSLKFGKGGQ
AHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEDGECKGVIALCMEDGSIH
RFRSNNTVIATGGYGRTYFSCTSAHTSTGDGNAMVTRAGLPCQDLEFVQFHPTGIYGAGC
LITEGCRGEGGILINSEGERFMERYAPNAKDLASRDVVSRSMTIEIREGRGCGPEKDHVY
LQLHHLPPQQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVITHP
DGEDKVVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALTIADTCTPGEKLSPLK
PSAGEESVANLDKIRFADGNTRTSEIRLNMQRTMQNHAAVFRTGDVLKEGCDKMDAIYQT
MEDIKTFDRGMVWNTDLVESLELQNLMLNAVQTIHSAEARKESRGAHAREDYKDRMDELD
YARPLAGQERKPFHQHWRKHTMSTVDPKTGKVTLEYRPVIDTSLDQEECSAIPPAIRSY
NT seq 1980 nt NT seq  +upstreamnt  +downstreamnt
atggcaagtgtatccagagtcctgaccaagaggtttttattagctaaagccctccctgca
gcagcccgatgtagctccaggaacatccacttctccatctatgggaagaaggacaacgcc
aaagtgtcagatgatatctcaacccagtacccggtagtggatcatgagtttgatgcggtg
gtggtaggggctgggggagcaggtctgagagctgcttttggtctgtctgaggctggcttc
aacacggcctgtgtcaccaagctgttccctactaggtctcacactgtggcagcacagggt
gggatcaatgcagccctgggtaacatggagggagatgattggaggtggcacttctacgac
acagtgaagggatctgattggctaggggaccaggatgctatccactacatgacagagcag
gccccagctgccgtggtggagctggagaactttggaatgcccttcagtcggacagaggat
gggaagatctatcagagggccttcgggggtcagagcctgaagtttggaaagggaggccaa
gcacaccgatgctgctgtgtagctgacaggactggacactcccttcttcacacattgtat
ggacggtccttaaggtacgataccagctactttgtggagtactttgccctggatctgctg
atggaggatggtgaatgcaaaggagtgatcgctctctgtatggaggatggatccatccac
cgctttagatccaacaacactgtcatcgctactggtggttatggccgtacctacttcagc
tgtacctcagcccacaccagcaccggggatggcaacgccatggtaaccagagctggccta
ccatgccaggacctggagtttgtacagttccaccccaccggtatctatggtgccggctgc
ctcatcactgagggttgccgtggcgagggagggatcctcatcaacagtgaaggagagcgc
tttatggaacgctacgctcccaacgccaaagatctggcctcccgggatgtggtgtcacgc
tccatgaccattgagatccgcgagggaaggggttgtggtccagaaaaggaccatgtgtac
ctgcagttgcatcacctgcccccccagcagctggccacccgcctgcctggtatctctgag
accgccatgatcttcgctggggttgacgtcaccaaagagcccatccctgtcctgcccacc
gtccactacaacatgggaggaatccccaccaactataagggacaggtcataactcatcca
gatggggaggacaaggtggtgccagggctgtatgcctgtggtgaggctgcctgtgccagt
gtccacggtgccaaccggctgggtgccaactccctgctggatctggtggtgtttggcaga
gcctgtgccctcaccatcgctgacacctgcactccaggtgagaagctttccccactgaag
cccagtgctggagaggagtctgtggccaacctggacaagatcaggtttgctgacgggaac
accagaacctctgagatcagactcaacatgcagagaacgatgcagaaccatgcagcagtg
ttccgtaccggcgacgttctgaaggagggatgtgacaagatggacgccatctaccagacc
atggaggacatcaagacattcgaccgtggtatggtgtggaacactgacctggtcgagtct
ctggagctgcagaacctgatgctgaacgcggtccagactatccactctgccgaggcccgc
aaggagagcaggggagcacacgcccgggaggactacaaggaccgtatggatgagctggac
tatgccaggcctctggcaggacaggagaggaagcctttccatcagcattggagaaaacac
accatgtccactgtggatcctaagactggcaaggtaactctggagtaccgaccagtgatt
gacacctctctggaccaggaggaatgttcagccatccctccagccatccgctcctattaa

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