Salmo salar (Atlantic salmon): 106573851
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Entry
106573851 CDS
T04363
Name
(RefSeq) non-homologous end-joining factor 1-like
KO
K10980
non-homologous end-joining factor 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
106573851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sasa03400
]
106573851
DNA repair and recombination proteins [BR:
sasa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
106573851
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XLF
Motif
Other DBs
NCBI-GeneID:
106573851
NCBI-ProteinID:
XP_014004727
UniProt:
A0A1S3MNH5
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All DBs
Position
ssa16:complement(41430572..41456943)
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AA seq
339 aa
AA seq
DB search
MERDAVDGDLLDCPWVPVCISGSQLLAKTWFGDTAYRILLTDLHSVWEEEMDTRAIQDRA
QELNRRLRAPVHAFFSHMCEVAHPCLSGRVEDGGEPQFSLNHHGGNINLKLKSELAGVPF
YWEFRCTPAPVALVCSQLVRPLLLMSRLLQRQVGQLGALLARKDTELQDYRDNGAVLSRE
RLQTELFEEQSYRENFLTQTVPQVCARQGGLGFDSELQELYSAVTSYGNTNARKRKISER
HAPEEDQSTTEDRDPNHAASGTQPPGEEVNHGLDQVNHGLDQVNHGLDQGDKRQTGRGDR
ARTTDSERPNEEQTTVPMAAAADRPSARPKKKKAKGLFG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggagagagatgcagtggatggagatctgctggactgtccctgggtaccagtgtgtatc
agtgggtctcagctcctggccaagacctggtttggggacacagcgtaccgcatcctgctc
acggacctgcactctgtgtgggaggaggagatggacaccagggccatccaggacagagct
caggagctgaaccggcgattgcgggctcccgtccacgccttcttctctcacatgtgtgag
gtggctcacccctgtctgtctggacgggtggaggatgggggtgagcctcagttctccctc
aaccaccacggcggtaacatcaacctgaagttgaagagtgagctggctggggtgcctttc
tactgggaattccgctgcacccctgcccctgttgctttggtgtgcagtcagcttgtgcgc
cccctgctgttgatgagcaggttactgcagagacaggtgggccaactgggagctctgctg
gccaggaaagacactgagctccaagactacagggacaatggggcggtgctgagcagagag
cgattgcagacagagttgtttgaggaacagagctacagagagaacttcctgacacagact
gtgccacaggtatgtgcgaggcagggcggtctggggtttgactctgagctgcaggagctc
tactcagccgtcacgtcctacggcaacaccaacgctcgcaaacgtaagatctctgagaga
cacgcccccgaagaggaccaatccaccacagaggaccgtgaccctaaccacgccgccagc
ggcacacagcccccaggagaggaggtgaaccacgggctggaccaggtgaaccacgggctg
gaccaggtgaaccatgggctggaccagggggataagaggcagactggacggggggaccga
gccagaaccacagactcagagagacctaatgaggaacagactacagttcccatggctgct
gccgcagatcggccctccgcgcgacccaagaagaagaaagctaaggggctttttggatga
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