Salmo salar (Atlantic salmon): 106577591
Help
Entry
106577591 CDS
T04363
Symbol
focad
Name
(RefSeq) focadhesin
Organism
sasa
Salmo salar (Atlantic salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
RTP1_C1
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
106577591
NCBI-ProteinID:
XP_014011254
UniProt:
A0A1S3N742
LinkDB
All DBs
Position
ssa18:49367278..49443369
Genome browser
AA seq
1815 aa
AA seq
DB search
MSENLKKRFDFPSPLIQAQTVRSLVAAVLKEKGQNERISQSSTQGPAMETLWEQCCSDCA
AVRSACCDAVVLLVEQAHADLHYILNSVLNLLPSARNVQGLIKVIGRLLQVQADQRDKGT
PFTCPYSIRSSPHPYIIVLENRPDCWPVLLLEIDDFIQRAADRGESAYVTMLAPFLRYLY
CEPQRLPEYALLRHSLLRVLLPPQPGDHNQEKKKDQENEEDPGQSPVVCHSLVRCLYELV
PHMQVDSVEAVLELRGLVEAMIPTLEMADWGSERARLALQLLCACQLSLKLSGDCRPLLQ
LLHQILPTRTEEFPVEDMMVGLALLLLEASASQQTGLLTLALSLAPPECERPPWGTPVLV
LPLLQVLSCSSLMEPLTDPCTHTRNQSLAHSLLQNAQRASSKPAEKVSLLALPLSPWSSE
VLVATQVLRQVTGDPVAASEWLLAVTSALPLSQRVPSPLTLTVAHLVVTGQQDVCRLALK
TAAAIALADPAQVPSLLHVLLFKLGKECDPDLSHAVLYSLPNFGTHKLCLPQVLHTLQML
GSAPKLRAVALRLMTALWEKQDRVYPDLQRLISQFEKSSVLLGKEAQWEQILARAACVRD
ICRERPYQHGGDMLAAITHTLAQCSRPDQAAPAALALQGLHELCRTEVVDVGSTWTALGP
KLSCDSRPLVVKAIAELLALLPQLTVKTEEYEKLKEQVVSFLWGYALNKEPEVASCGYKA
LSEFSEAAHTLLHLPEQARPVAKLPESVEEEQVKEKEEEEEEEDLSIPGPSYVKLLGLTS
LSVLPAFELFLTSLVRQEMSQMPRGVYHSALKRGSLRSDQGKTVAGIPGFMLKTYEKSKQ
PGLKPGLAAGLLLSFDLPVQTDRDGRPINRFLLSRGRSYQQMLATLIHEVNIQPSEWHRA
LLLPQAWRGFMSRAYHSVLQGRRAELEMQQKQGKESPEELQYKQHCAWLWVRDQLTDVVK
SAAKDSPVVQGNSILALSGLAAVLAKYESNMPADTEGGLGVGPEILSTSTWLAMVLDTLL
SIVSSSYKPRGQVFPWFLHRSYSGENTASAIARSCAALALSLVVPVLVAWHKDSVPQVLA
TLRAGLPGSPTADDSQAVQFHSGLALGMLLSCLHQERLSDVSGQKITELLMSSLDTLEAC
CFDSNLEYNAGCVLGLGLVLGAVSGSGQTEHRARVGLTLDKLLEALQGDSSSQGRMLQEV
LAYSVAGVGVAAFSGGVVDALKAEEIMSALRSMTEESQQTPGFSLALGLVVHGLSSCGHG
KAEDIQPRLLDAWIKILLAEGCPTMQRLAAVNGLVALVGSETGILQLKNESEQSSQQQSR
MNEVIRAITQIITFSGAIGLQSNSACLVGHLHLAHMSTSHSRTAVPQDFSYLPEKSVIRS
VVDFLAEAGKKGPEFSHPSLVKTGLGSLATVGGSYQYPPVNWSAILSPLMRLNFGEVVQH
QCIELASNQAQSSQSASLFLGVWLSPPLVHSLSMRTRGHLYDNLSVWMKHVSEDKLQVYV
ETLGLQQFQQDVRPQRLAICLSLLRGLAQAMALPNPPNTVWAVLCTTIEKIFNVLPNHIQ
DQEVHLYVGVSKCLSELADTEIDRIAQVTEAQMEKTGFILAHLTSQGRVPLLGLNDVIAA
VLRGWSSHKVGWLLLQTFYQCRLAASPNTGVSKRMEWLLELMGLIRNVAYGVTTVKCGDT
RQATDFLLQVFAAAVISWGDHTMPLLLGIRTQWFPWQQGSEPPGLPHALYGDAVLAEQSV
SLCLLGLPHSLRQLLAKEPWREQSQKFIDWLFSITEGPETGLSETSINTAKAALLALKSS
TDFKKKAVWTRAYGW
NT seq
5448 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagaatttgaaaaagagatttgactttcccagcccgctcatacaggcccagacg
gtgaggagtctggttgcggctgtgctgaaagagaagggccagaatgagaggatcagccag
tcctccacccagggcccagctatggagaccctgtgggagcagtgctgcagtgactgtgct
gctgtgcgctcagcctgctgtgacgccgtggtgcttctggtagagcaggcccatgccgac
ctgcactacatactcaacagcgtcctcaacctcctgccctctgccaggaatgtgcagggg
ttgataaaggtgataggaaggcttctccaggtgcaagcggaccagcgagacaaaggaacg
cccttcacttgtccctactccatcaggagcagcccccatccatacatcatcgtcttggag
aaccgtcctgactgctggcccgttctgctgctggagattgacgacttcatccagcgggcc
gctgacaggggtgagtctgcgtacgtgaccatgttggcccccttcctgcgctacctgtac
tgtgagccccagcggctgccagagtacgccctgctcagacacagcctcctcagggtccta
ctacccccacagccgggggatcacaaccaagaaaagaagaaagaccaggaaaatgaagag
gacccgggacagagccctgtggtatgccacagcctggttcgctgtctctacgagctagtt
cctcacatgcaggtggacagtgtggaggcagtgttggagctgcggggcctagtcgaggcc
atgatcccgaccctggagatggccgactgggggagtgagagggcccggctggccctgcag
ctgctgtgtgcctgtcagctaagtctgaagcttagcggagactgcagaccactactccaa
ctactgcaccagatcctccccacccgcacagaggagttccctgtggaggacatgatggtg
ggcttggctctgctccttctcgaggcctcagcgtcccagcagaccgggctgcttacactg
gccctaagtctggcccccccagagtgtgagcgacccccctgggggaccccggtgctggtg
ctgcctctcctgcaagtcctctcctgctcctccctcatggagccactgacggacccatgc
acacacacacgcaaccagagcctggcccacagcctcctacagaatgcccagagagcatcc
tccaagcctgctgagaaggtgtccctgttagccttacccctcagcccgtggtccagtgag
gtgctggtggccacccaggtcctacgccaggtgacgggggacccggtggcggctagcgag
tggctcttggcggtgacctcggccctgcccctgagccagcgcgtcccctctcccctcacc
cttaccgtggctcacctggtggtcaccggtcagcaggacgtctgcagactggccctgaaa
accgcagctgccatcgccctggcagaccccgcacaggtcccatcccttcttcatgttctg
ttgtttaagctggggaaggagtgtgacccagacttgtcccacgctgtgctgtactcgctg
ccaaactttgggacccacaagttgtgtcttccccaggtgctccacactctccagatgctg
ggcagcgcccccaagctgagggccgtggcactgcgcctcatgaccgctctgtgggagaaa
caggaccgtgtgtatcctgacctccagaggctgatctcccagtttgagaagtcctctgtg
ctcctggggaaggaggcccagtgggaacagattctagccagggctgcctgtgtcagagac
atttgcagagagaggccctaccagcacggaggggacatgctggctgccatcacacacact
ctggcccagtgttccagaccagaccaggccgcccctgctgccttggccctgcaaggcctc
cacgagctctgccgcaccgaggtggtggatgtgggttccacatggacagccttgggccct
aagctgagctgtgactccagacctctggtggtcaaggccatagcagagctcctggctctg
ctgccacagctcactgtcaagactgaggagtacgagaaactcaaagagcaggttgtcagc
tttctctggggctatgctctcaacaaggaacctgaggtggccagttgtggatacaaggct
ctgtcagagttctcagaggcagcgcacacgctccttcacctccccgagcaggccaggccg
gtcgcaaaacttcctgaaagtgtggaggaggaacaggtaaaggagaaagaggaggaggag
gaggaagaagatttgtccattccaggtccatcctatgtgaagctcctaggtctcacatcc
ctctcagtcctgccagcatttgagctcttcctgacatcactggtgaggcaggagatgagc
cagatgccccgtggggtgtaccactctgccctgaaaagggggagcctccggtcagaccag
gggaaaacggtggcagggatcccaggcttcatgctgaagacctatgagaagagcaaacag
cctggtctcaaacctggcctggcagccggcctcctcctctcctttgacctgcccgtccag
accgaccgagatggacgaccaatcaaccgcttcctcctcagcagggggcggagctaccag
cagatgttagccactctcattcacgaggtgaacattcagccgtcagagtggcatcgtgcc
ctcctcctaccccaggcctggcgagggttcatgagtcgagcttaccattccgtcctacag
ggtcgtcgggcagagctggagatgcagcaaaagcaaggcaaggagagtccagaggagctg
cagtacaaacagcactgtgcctggctctgggtcagggaccagctgactgatgttgtcaaa
tctgcagcaaaggacagtccggtggtgcaggggaactccatcttggctctgagcggtctg
gctgcagtgctggccaaatacgagagcaacatgcccgctgacacggagggaggacttggg
gtgggccctgagatcctgtccacatctacctggctggccatggtcctggacactctcctc
agcatcgtcagcagcagctacaagcccagaggacaagtcttcccctggttcctacaccgg
tcctactcgggagagaacacggccagtgccatcgcccgctcctgtgccgccctggccctg
tccctggtggtgcccgtgctggttgcctggcacaaggacagcgtgccacaggtcctagcc
accctgagggcggggcttcccggctcgcccaccgcagacgactcccaggccgtccagttc
cactctggcctggccctgggcatgctgctgtcctgcctgcaccaggagaggctcagtgat
gtgtcaggtcagaagatcacagagctgttgatgagttctctagacactctggaagcctgc
tgctttgacagcaacctggagtacaatgcgggctgtgtgctgggcctaggcctggtgctg
ggggccgttagtggcagtggacagacagaacaccgggcccgtgtgggcctcaccctggac
aagctgctggaggccctacagggggacagcagcagtcagggtcgcatgctgcaggaggtg
ttggcctactctgtagcaggtgtgggggtggcagccttcagtggaggggtagttgatgcc
cttaaagcagaggagatcatgagcgctcttcgtagcatgacagaggagagccagcagact
ccaggtttctcattggctcttggcctggttgttcatggtctgtcgtcctgcggccacggc
aaggcagaggacatccaaccccgccttctggatgcctggataaagatcctactggctgag
ggctgtcccaccatgcagaggctggctgctgtcaacggcctggtggctctggtgggatca
gagactggcatccttcagctgaagaatgaatctgagcagtcctcccagcagcagagcaga
atgaacgaggtcatacgggccatcacacagatcatcacattctcaggggccatcgggctg
cagtctaacagtgcctgtctggtggggcacctccacctggcccacatgtccaccagccac
agtcgcacagcagtgccccaggacttcagttacctcccagagaagagtgtgatcaggtcg
gttgtggacttcctcgccgaggcaggaaagaaaggtccagagttttcccaccctagtctg
gtgaagacaggcttgggctccctggccacagtgggagggagttaccagtacccccctgtc
aactggagcgccatcctgtcccctctcatgaggctcaactttggtgaggtggtccaacac
caatgtatagagctggcatccaaccaagcccagtcttcccagagtgcatctctcttcctg
ggggtgtggctgagccctcccctggtccacagtcttagtatgcggacgcgaggtcacctg
tacgataatctctctgtatggatgaagcacgtgtcggaggacaagcttcaggtttacgtg
gagaccctgggtctgcagcagttccagcaggacgtccggccccagcgcctggccatttgt
ttgtccctcctccggggcctggcacaggccatggccctccccaacccgcccaacacagtc
tgggccgtcctgtgtactactatagagaagatcttcaacgtactccccaaccacatacag
gaccaagaggtgcacctgtacgtgggagtttccaaatgtctgtccgagttggctgacaca
gagatcgaccgcatcgcccaggtcacagaggcacagatggagaagaccggcttcatcctg
gctcacctcacctcccagggccgcgtgccacttctgggcctcaacgatgtcatcgctgcc
gtgctccggggttggtccagccacaaggtgggctggctcctcctgcagactttctaccaa
tgccgtctggccgccagtcccaacacaggtgtgtccaaacgaatggagtggcttttggag
ctgatgggactcataagaaatgttgcttacggagtgaccactgtcaagtgtggagacacc
aggcaggccacagacttcctgctccaggtattcgctgcggcggtgatctcctggggcgac
cacaccatgcccctcctcctgggcattaggacccagtggtttccatggcagcaggggtca
gagccgcccggtctacctcatgctctctacggtgacgccgtgctggctgagcagtcagtc
tcgctatgcctgttgggattgccccacagcctgaggcagctattggctaaagagccctgg
agggaacagtcacagaagttcatagattggcttttcagcatcactgaaggtccggaaact
ggtctgtcagagacttccatcaacactgccaaagctgccttgctggctctgaagtcctcc
acggatttcaagaaaaaagcggtgtggacgcgagcgtacggttggtga
DBGET
integrated database retrieval system